RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.745e-7■□□□□ 8.7
SSBP1-214ENST00000498107 PMVKQ15126 192 aa10.44□□□□□ -0.74
SSBP1-214ENST00000498107 PMCHL1Q16048 86 aa10.44□□□□□ -0.74
SSBP1-214ENST00000498107 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
SSBP1-214ENST00000498107 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
SSBP1-214ENST00000498107 C5orf38Q86SI9 138 aa10.44□□□□□ -0.74
SSBP1-214ENST00000498107 HERC2O95714 4834 aa10.43□□□□□ -0.74
SSBP1-214ENST00000498107 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
SSBP1-214ENST00000498107 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
SSBP1-214ENST00000498107 HERVK_113P63121 156 aa10.43□□□□□ -0.74
SSBP1-214ENST00000498107 PDZD11Q5EBL8 140 aa10.43□□□□□ -0.74
SSBP1-214ENST00000498107 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
SSBP1-214ENST00000498107 ZC2HC1BQ5TFG8 222 aa10.42□□□□□ -0.74
SSBP1-214ENST00000498107 CST9LQ9H4G1 147 aa10.42□□□□□ -0.74
SSBP1-214ENST00000498107 GEMIN7Q9H840 131 aaKnown RBP10.42□□□□□ -0.74
SSBP1-214ENST00000498107 A0A087WZ39 114 aa10.41□□□□□ -0.74
SSBP1-214ENST00000498107 SERF1AO75920 110 aa10.41□□□□□ -0.74
SSBP1-214ENST00000498107 LINC01561Q8N1V8 128 aa10.41□□□□□ -0.74
SSBP1-214ENST00000498107 OR10D4PQ8NGN7 298 aa10.41□□□□□ -0.74
SSBP1-214ENST00000498107 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
SSBP1-214ENST00000498107 DYNC1H1Q14204 4646 aaKnown RBP10.41□□□□□ -0.74
SSBP1-214ENST00000498107 DNAH5Q8TE73 4624 aa10.41□□□□□ -0.74
SSBP1-214ENST00000498107 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
SSBP1-214ENST00000498107 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BKO60814 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BJP06899 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BOP23527 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BBP33778 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 NDUFA6P56556 154 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BDP58876 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BCP62807 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 COX6A2Q02221 97 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST2H2BEQ16778 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BHQ93079 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BNQ99877 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 HIST1H2BMQ99879 126 aa10.39□□□□□ -0.75
SSBP1-214ENST00000498107 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 A0A0J9YXV3 536 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 F8WDY8 70 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 FAM19A2Q8N3H0 131 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
SSBP1-214ENST00000498107 SPAG11BQ08648 103 aa10.37□□□□□ -0.75
SSBP1-214ENST00000498107 IFI27L1Q96BM0 104 aa10.37□□□□□ -0.75
SSBP1-214ENST00000498107 C2orf48Q96LS8 159 aa10.37□□□□□ -0.75
SSBP1-214ENST00000498107 PACRGQ96M98 296 aaPredicted RBP10.37□□□□□ -0.75
SSBP1-214ENST00000498107 LEPROTL1O95214 131 aa10.36□□□□□ -0.75
SSBP1-214ENST00000498107 LINC00310P59036 64 aa10.36□□□□□ -0.75
SSBP1-214ENST00000498107 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
SSBP1-214ENST00000498107 LRP1BQ9NZR2 4599 aa10.36□□□□□ -0.75
SSBP1-214ENST00000498107 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
SSBP1-214ENST00000498107 SLPIP03973 132 aa10.35□□□□□ -0.75
SSBP1-214ENST00000498107 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
SSBP1-214ENST00000498107 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
SSBP1-214ENST00000498107 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
SSBP1-214ENST00000498107 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
SSBP1-214ENST00000498107 IGLV5-45A0A087WSX0 123 aa10.34□□□□□ -0.75
SSBP1-214ENST00000498107 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
SSBP1-214ENST00000498107 H3BRM9 83 aa10.34□□□□□ -0.75
SSBP1-214ENST00000498107 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
SSBP1-214ENST00000498107 LINC01620Q4KN68 170 aa10.34□□□□□ -0.75
SSBP1-214ENST00000498107 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
SSBP1-214ENST00000498107 KIAA1109Q2LD37 5005 aa10.33□□□□□ -0.76
SSBP1-214ENST00000498107 PRSS2P07478 247 aa10.33□□□□□ -0.76
SSBP1-214ENST00000498107 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
SSBP1-214ENST00000498107 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
SSBP1-214ENST00000498107 NDUFA1O15239 70 aa10.32□□□□□ -0.76
SSBP1-214ENST00000498107 NUPR1O60356 82 aa10.32□□□□□ -0.76
SSBP1-214ENST00000498107 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
SSBP1-214ENST00000498107 SDIM1Q6ZPB5 146 aa10.31□□□□□ -0.76
SSBP1-214ENST00000498107 Q6ZSA8 131 aa10.31□□□□□ -0.76
SSBP1-214ENST00000498107 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
SSBP1-214ENST00000498107 COA6Q5JTJ3 125 aaKnown RBP10.3□□□□□ -0.76
SSBP1-214ENST00000498107 Q8IZM0 81 aa10.3□□□□□ -0.76
SSBP1-214ENST00000498107 F8VRH5 84 aa10.29□□□□□ -0.76
SSBP1-214ENST00000498107 FABP4P15090 132 aa10.29□□□□□ -0.76
SSBP1-214ENST00000498107 KIAA0087Q14695 138 aa10.29□□□□□ -0.76
SSBP1-214ENST00000498107 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
SSBP1-214ENST00000498107 Q6ZRU5 148 aa10.29□□□□□ -0.76
SSBP1-214ENST00000498107 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
SSBP1-214ENST00000498107 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
SSBP1-214ENST00000498107 SMIM1B2RUZ4 78 aa10.28□□□□□ -0.76
SSBP1-214ENST00000498107 CKS1BP61024 79 aa10.28□□□□□ -0.76
SSBP1-214ENST00000498107 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
SSBP1-214ENST00000498107 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
SSBP1-214ENST00000498107 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
SSBP1-214ENST00000498107 CXCL5P42830 114 aa10.27□□□□□ -0.77
SSBP1-214ENST00000498107 XGP55808 180 aa10.27□□□□□ -0.77
SSBP1-214ENST00000498107 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
SSBP1-214ENST00000498107 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
SSBP1-214ENST00000498107 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
SSBP1-214ENST00000498107 C11orf86A6NJI1 115 aa10.26□□□□□ -0.77
SSBP1-214ENST00000498107 H0Y8G0 127 aa10.26□□□□□ -0.77
SSBP1-214ENST00000498107 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
SSBP1-214ENST00000498107 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
SSBP1-214ENST00000498107 UNQ6190/PRO20217Q6UXQ8 127 aa10.25□□□□□ -0.77
SSBP1-214ENST00000498107 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms