RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 C2orf66Q6UXQ4 117 aa11.88□□□□□ -0.51
PRKCB-209ENST00000498058 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
PRKCB-209ENST00000498058 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
PRKCB-209ENST00000498058 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
PRKCB-209ENST00000498058 SPANXA1Q9NS26 97 aa11.88□□□□□ -0.51
PRKCB-209ENST00000498058 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
PRKCB-209ENST00000498058 SERTAD4-AS1Q5TG53 156 aa11.87□□□□□ -0.51
PRKCB-209ENST00000498058 OR5A1Q8NGJ0 315 aa11.87□□□□□ -0.51
PRKCB-209ENST00000498058 URB1-AS1Q96HZ7 61 aa11.87□□□□□ -0.51
PRKCB-209ENST00000498058 UBR4Q5T4S7 5183 aa11.87□□□□□ -0.51
PRKCB-209ENST00000498058 IGLV4-60A0A075B6I1 120 aa11.86□□□□□ -0.51
PRKCB-209ENST00000498058 SERF1AO75920 110 aa11.86□□□□□ -0.51
PRKCB-209ENST00000498058 HBDP02042 147 aa11.86□□□□□ -0.51
PRKCB-209ENST00000498058 TOMM6Q96B49 74 aa11.86□□□□□ -0.51
PRKCB-209ENST00000498058 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
PRKCB-209ENST00000498058 SLPIP03973 132 aa11.85□□□□□ -0.51
PRKCB-209ENST00000498058 RPL39P62891 51 aaKnown RBP11.85□□□□□ -0.51
PRKCB-209ENST00000498058 REG3AQ06141 175 aa11.85□□□□□ -0.51
PRKCB-209ENST00000498058 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
PRKCB-209ENST00000498058 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
PRKCB-209ENST00000498058 NPSP0C0P6 89 aa11.84□□□□□ -0.51
PRKCB-209ENST00000498058 NDUFA6P56556 154 aa11.84□□□□□ -0.51
PRKCB-209ENST00000498058 PAPPA-AS1Q5QFB9 102 aa11.84□□□□□ -0.51
PRKCB-209ENST00000498058 S100A6P06703 90 aa11.83□□□□□ -0.52
PRKCB-209ENST00000498058 COA6Q5JTJ3 125 aaKnown RBP11.83□□□□□ -0.52
PRKCB-209ENST00000498058 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
PRKCB-209ENST00000498058 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
PRKCB-209ENST00000498058 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
PRKCB-209ENST00000498058 TIMM17AQ99595 171 aa11.82□□□□□ -0.52
PRKCB-209ENST00000498058 MT1HL1P0DM35 61 aa11.81□□□□□ -0.52
PRKCB-209ENST00000498058 CNBPP62633 177 aaKnown RBP11.81□□□□□ -0.52
PRKCB-209ENST00000498058 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
PRKCB-209ENST00000498058 PMCHL1Q16048 86 aa11.81□□□□□ -0.52
PRKCB-209ENST00000498058 Q6ZN92 141 aa11.81□□□□□ -0.52
PRKCB-209ENST00000498058 ERASQ7Z444 233 aa11.81□□□□□ -0.52
PRKCB-209ENST00000498058 ZNF664Q8N3J9 261 aa11.81□□□□□ -0.52
PRKCB-209ENST00000498058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-209ENST00000498058 ATP5LO75964 103 aa11.8□□□□□ -0.52
PRKCB-209ENST00000498058 LINC00310P59036 64 aa11.8□□□□□ -0.52
PRKCB-209ENST00000498058 CDC42SE2Q9NRR3 84 aa11.8□□□□□ -0.52
PRKCB-209ENST00000498058 hDV102S1A0JD36 115 aa11.79□□□□□ -0.52
PRKCB-209ENST00000498058 CHTF8P0CG12 524 aa11.79□□□□□ -0.52
PRKCB-209ENST00000498058 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
PRKCB-209ENST00000498058 PLA2G2DQ9UNK4 145 aa11.79□□□□□ -0.52
PRKCB-209ENST00000498058 A0A096LNJ9 63 aa11.78□□□□□ -0.52
PRKCB-209ENST00000498058 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
PRKCB-209ENST00000498058 PDZD11Q5EBL8 140 aa11.78□□□□□ -0.52
PRKCB-209ENST00000498058 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 LEPROTL1O95214 131 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 TEX43Q6ZNM6 134 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 Q6ZUT4 128 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 VCX2Q9H322 139 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 HSPB8Q9UJY1 196 aa11.77□□□□□ -0.53
PRKCB-209ENST00000498058 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
PRKCB-209ENST00000498058 NUPR1O60356 82 aa11.76□□□□□ -0.53
PRKCB-209ENST00000498058 PACRGQ96M98 296 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-209ENST00000498058 A0A087WYN8 130 aa11.75□□□□□ -0.53
PRKCB-209ENST00000498058 CCL25O15444 150 aa11.75□□□□□ -0.53
PRKCB-209ENST00000498058 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
PRKCB-209ENST00000498058 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
PRKCB-209ENST00000498058 SPACA4Q8TDM5 124 aa11.74□□□□□ -0.53
PRKCB-209ENST00000498058 OPRPNQ99935 248 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-209ENST00000498058 IGHV3-64A0A075B6Q5 118 aa11.73□□□□□ -0.53
PRKCB-209ENST00000498058 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
PRKCB-209ENST00000498058 S100A2P29034 98 aa11.73□□□□□ -0.53
PRKCB-209ENST00000498058 SS18Q15532 418 aa11.73□□□□□ -0.53
PRKCB-209ENST00000498058 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
PRKCB-209ENST00000498058 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
PRKCB-209ENST00000498058 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
PRKCB-209ENST00000498058 FABP4P15090 132 aa11.72□□□□□ -0.53
PRKCB-209ENST00000498058 AMELXQ99217 191 aa11.72□□□□□ -0.53
PRKCB-209ENST00000498058 TNXBP22105 4242 aa11.71□□□□□ -0.53
PRKCB-209ENST00000498058 PMVKQ15126 192 aa11.71□□□□□ -0.53
PRKCB-209ENST00000498058 Q6ZRU5 148 aa11.71□□□□□ -0.53
PRKCB-209ENST00000498058 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
PRKCB-209ENST00000498058 LINC00959A0A1B0GUT2 108 aa11.7□□□□□ -0.54
PRKCB-209ENST00000498058 FAM104AQ969W3 186 aa11.7□□□□□ -0.54
PRKCB-209ENST00000498058 TMA7Q9Y2S6 64 aaKnown RBP11.7□□□□□ -0.54
PRKCB-209ENST00000498058 SNRPEP62304 92 aaKnown RBP11.69□□□□□ -0.54
PRKCB-209ENST00000498058 SEC11AP67812 179 aa11.69□□□□□ -0.54
PRKCB-209ENST00000498058 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
PRKCB-209ENST00000498058 HIST3H2BBQ8N257 126 aa11.69□□□□□ -0.54
PRKCB-209ENST00000498058 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
PRKCB-209ENST00000498058 MAP1LC3CQ9BXW4 147 aa11.69□□□□□ -0.54
PRKCB-209ENST00000498058 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
PRKCB-209ENST00000498058 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-209ENST00000498058 COX6A2Q02221 97 aa11.68□□□□□ -0.54
PRKCB-209ENST00000498058 CST9LQ9H4G1 147 aa11.68□□□□□ -0.54
PRKCB-209ENST00000498058 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
PRKCB-209ENST00000498058 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
PRKCB-209ENST00000498058 LINC00173Q6ZV60 143 aa11.67□□□□□ -0.54
PRKCB-209ENST00000498058 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-209ENST00000498058 UBE2D1P51668 147 aa11.66□□□□□ -0.54
PRKCB-209ENST00000498058 XCL1P47992 114 aa11.65□□□□□ -0.54
PRKCB-209ENST00000498058 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
PRKCB-209ENST00000498058 HERVK_113P63121 156 aa11.64□□□□□ -0.55
PRKCB-209ENST00000498058 CD164L2Q6UWJ8 174 aa11.64□□□□□ -0.55
PRKCB-209ENST00000498058 FAM19A3Q7Z5A8 133 aa11.64□□□□□ -0.55
PRKCB-209ENST00000498058 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms