RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 GEMIN7Q9H840 131 aaKnown RBP9.01□□□□□ -0.97
CPNE1-227ENST00000498056 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
CPNE1-227ENST00000498056 COX7A2LO14548 114 aa9□□□□□ -0.97
CPNE1-227ENST00000498056 HERVK_113P63121 156 aa9□□□□□ -0.97
CPNE1-227ENST00000498056 SEC11AP67812 179 aa9□□□□□ -0.97
CPNE1-227ENST00000498056 MAPKAPK5-AS1Q8N8E1 139 aa9□□□□□ -0.97
CPNE1-227ENST00000498056 TRAV12-1A0A0B4J245 112 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 MALP21145 153 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 KRTDAPP60985 99 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 TNP2Q05952 138 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 WFDC2Q14508 124 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 C5orf38Q86SI9 138 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 LINC00469Q8N7U9 141 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
CPNE1-227ENST00000498056 IGLV4-69A0A075B6H9 119 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 C5orf52A6NGY3 159 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 F8VRH5 84 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 IGLC3P0DOY3 106 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 COX6A2Q02221 97 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 ODF1Q14990 250 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
CPNE1-227ENST00000498056 MRPL35Q9NZE8 188 aaKnown RBP8.98□□□□□ -0.97
CPNE1-227ENST00000498056 IGHV3OR16-9A0A0B4J2B5 98 aa8.97□□□□□ -0.97
CPNE1-227ENST00000498056 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
CPNE1-227ENST00000498056 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
CPNE1-227ENST00000498056 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.97
CPNE1-227ENST00000498056 A0A087WTM6 91 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 C11orf86A6NJI1 115 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 SYS1-DBNDD2H3BUS1 97 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 EREGO14944 169 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 CDKN2A-AS1Q9UH64 79 aa8.96□□□□□ -0.98
CPNE1-227ENST00000498056 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
CPNE1-227ENST00000498056 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
CPNE1-227ENST00000498056 TMEM170BQ5T4T1 132 aa8.95□□□□□ -0.98
CPNE1-227ENST00000498056 SPATA12Q7Z6I5 190 aa8.95□□□□□ -0.98
CPNE1-227ENST00000498056 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
CPNE1-227ENST00000498056 ORAOV1Q8WV07 137 aa8.95□□□□□ -0.98
CPNE1-227ENST00000498056 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
CPNE1-227ENST00000498056 A0A087WZ39 114 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 C20orf202A1L168 122 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 H3BRM9 83 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 APOMO95445 188 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 PLNP26678 52 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 C14orf177Q52M58 125 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 CFAP161Q6P656 301 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 PET117Q6UWS5 81 aa8.94□□□□□ -0.98
CPNE1-227ENST00000498056 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
CPNE1-227ENST00000498056 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
CPNE1-227ENST00000498056 DPM2O94777 84 aa8.93□□□□□ -0.98
CPNE1-227ENST00000498056 SPINK8P0C7L1 97 aa8.93□□□□□ -0.98
CPNE1-227ENST00000498056 SPAG11BQ08648 103 aa8.93□□□□□ -0.98
CPNE1-227ENST00000498056 Q8N814 137 aa8.93□□□□□ -0.98
CPNE1-227ENST00000498056 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
CPNE1-227ENST00000498056 IGKCP01834 107 aa8.92□□□□□ -0.98
CPNE1-227ENST00000498056 LINC01545Q5VT33 79 aa8.92□□□□□ -0.98
CPNE1-227ENST00000498056 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
CPNE1-227ENST00000498056 SMIM1B2RUZ4 78 aa8.91□□□□□ -0.98
CPNE1-227ENST00000498056 OR10D4PQ8NGN7 298 aa8.91□□□□□ -0.98
CPNE1-227ENST00000498056 LINC00526Q96FQ7 95 aa8.91□□□□□ -0.98
CPNE1-227ENST00000498056 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
CPNE1-227ENST00000498056 ZNF561-AS1K7EIQ3 104 aa8.9□□□□□ -0.98
CPNE1-227ENST00000498056 PRSS2P07478 247 aa8.9□□□□□ -0.98
CPNE1-227ENST00000498056 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.98
CPNE1-227ENST00000498056 DNAH11Q96DT5 4516 aa8.89□□□□□ -0.99
CPNE1-227ENST00000498056 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.99
CPNE1-227ENST00000498056 HERVK_113P61574 105 aa8.88□□□□□ -0.99
CPNE1-227ENST00000498056 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
CPNE1-227ENST00000498056 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
CPNE1-227ENST00000498056 ATOH7Q8N100 152 aa8.87□□□□□ -0.99
CPNE1-227ENST00000498056 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
CPNE1-227ENST00000498056 PKD1P98161 4303 aa8.86□□□□□ -0.99
CPNE1-227ENST00000498056 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
CPNE1-227ENST00000498056 Q8IZM0 81 aa8.86□□□□□ -0.99
CPNE1-227ENST00000498056 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
CPNE1-227ENST00000498056 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
CPNE1-227ENST00000498056 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
CPNE1-227ENST00000498056 SCGB1D1O95968 90 aa8.85□□□□□ -0.99
CPNE1-227ENST00000498056 CKS1BP61024 79 aa8.85□□□□□ -0.99
CPNE1-227ENST00000498056 NTN5Q8WTR8 489 aaPredicted RBP8.85□□□□□ -0.99
CPNE1-227ENST00000498056 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
CPNE1-227ENST00000498056 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
CPNE1-227ENST00000498056 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
CPNE1-227ENST00000498056 NDUFA1O15239 70 aa8.84□□□□□ -0.99
CPNE1-227ENST00000498056 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
CPNE1-227ENST00000498056 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
CPNE1-227ENST00000498056 HECTD4Q9Y4D8 3996 aa8.84□□□□□ -0.99
CPNE1-227ENST00000498056 AKR1D1P51857 326 aa8.83□□□□□ -1
CPNE1-227ENST00000498056 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
CPNE1-227ENST00000498056 KIAA0087Q14695 138 aa8.83□□□□□ -1
CPNE1-227ENST00000498056 C6orf226Q5I0X4 101 aa8.83□□□□□ -1
CPNE1-227ENST00000498056 CDPF1Q6NVV7 123 aa8.83□□□□□ -1
CPNE1-227ENST00000498056 Q6ZRU5 148 aa8.83□□□□□ -1
CPNE1-227ENST00000498056 C2orf48Q96LS8 159 aa8.83□□□□□ -1
CPNE1-227ENST00000498056 CXCL5P42830 114 aa8.82□□□□□ -1
CPNE1-227ENST00000498056 LINC01620Q4KN68 170 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms