RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 NPYP01303 97 aa6.24□□□□□ -1.41
PTPN3-206ENST00000497739 ESDP10768 282 aa6.24□□□□□ -1.41
PTPN3-206ENST00000497739 IFI27P40305 119 aaPredicted RBP6.24□□□□□ -1.41
PTPN3-206ENST00000497739 XCL1P47992 114 aa6.24□□□□□ -1.41
PTPN3-206ENST00000497739 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
PTPN3-206ENST00000497739 COX19Q49B96 90 aa6.24□□□□□ -1.41
PTPN3-206ENST00000497739 MRPL52Q86TS9 123 aaKnown RBP6.24□□□□□ -1.41
PTPN3-206ENST00000497739 ZNF664Q8N3J9 261 aa6.24□□□□□ -1.41
PTPN3-206ENST00000497739 LOC389332A0A1B0GUA5 103 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 C1orf196B1AJZ1 125 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 CCL25O15444 150 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
PTPN3-206ENST00000497739 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 G0S2P27469 103 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
PTPN3-206ENST00000497739 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 LINC00959A0A1B0GUT2 108 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 SNAPINO95295 136 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 APOC3P02656 99 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 HAMPP81172 84 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 ORMDL2Q53FV1 153 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 Q6ZN92 141 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 SVBPQ8N300 66 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
PTPN3-206ENST00000497739 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 UBE2D4Q9Y2X8 147 aa6.22□□□□□ -1.41
PTPN3-206ENST00000497739 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
PTPN3-206ENST00000497739 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 APOMO95445 188 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 MT-ND6P03923 174 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 PRSS1P07477 247 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 CYSLTR1Q9Y271 337 aa6.21□□□□□ -1.42
PTPN3-206ENST00000497739 CARHSP1Q9Y2V2 147 aaKnown RBP6.21□□□□□ -1.42
PTPN3-206ENST00000497739 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 IFITM10A6NMD0 228 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 K7EMI3 77 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 COX7A2LO14548 114 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 HIGD2BQ4VC39 106 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 RNASE13Q5GAN3 156 aaKnown RBP6.2□□□□□ -1.42
PTPN3-206ENST00000497739 PAPPA-AS1Q5QFB9 102 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 CD164L2Q6UWJ8 174 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 Q6ZUT4 128 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 SMCO4Q9NRQ5 59 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
PTPN3-206ENST00000497739 TGIF2-C20orf24A0A0A6YYL0 155 aa6.19□□□□□ -1.42
PTPN3-206ENST00000497739 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
PTPN3-206ENST00000497739 RPL39P62891 51 aaKnown RBP6.19□□□□□ -1.42
PTPN3-206ENST00000497739 FOXI1Q12951 378 aa6.19□□□□□ -1.42
PTPN3-206ENST00000497739 SERTAD4-AS1Q5TG53 156 aa6.19□□□□□ -1.42
PTPN3-206ENST00000497739 TEX43Q6ZNM6 134 aa6.19□□□□□ -1.42
PTPN3-206ENST00000497739 Q8N8P6 123 aa6.19□□□□□ -1.42
PTPN3-206ENST00000497739 GNB1LQ9BYB4 327 aa6.19□□□□□ -1.42
PTPN3-206ENST00000497739 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
PTPN3-206ENST00000497739 FABP9Q0Z7S8 132 aa6.18□□□□□ -1.42
PTPN3-206ENST00000497739 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
PTPN3-206ENST00000497739 KRTAP26-1Q6PEX3 210 aa6.18□□□□□ -1.42
PTPN3-206ENST00000497739 C9orf163Q8N9P6 203 aa6.18□□□□□ -1.42
PTPN3-206ENST00000497739 TMEM141Q96I45 108 aa6.18□□□□□ -1.42
PTPN3-206ENST00000497739 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
PTPN3-206ENST00000497739 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
PTPN3-206ENST00000497739 C10orf91Q5T1B1 145 aa6.17□□□□□ -1.42
PTPN3-206ENST00000497739 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
PTPN3-206ENST00000497739 FA2HQ7L5A8 372 aa6.17□□□□□ -1.42
PTPN3-206ENST00000497739 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
PTPN3-206ENST00000497739 C15orf56Q8N910 161 aa6.16□□□□□ -1.42
PTPN3-206ENST00000497739 CARD19Q96LW7 228 aa6.16□□□□□ -1.42
PTPN3-206ENST00000497739 CHAC1Q9BUX1 264 aa6.16□□□□□ -1.42
PTPN3-206ENST00000497739 VCX2Q9H322 139 aa6.16□□□□□ -1.42
PTPN3-206ENST00000497739 TRAPPC1Q9Y5R8 145 aa6.16□□□□□ -1.42
PTPN3-206ENST00000497739 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
PTPN3-206ENST00000497739 SEC11AP67812 179 aa6.15□□□□□ -1.42
PTPN3-206ENST00000497739 Q6ZSA8 131 aa6.15□□□□□ -1.42
PTPN3-206ENST00000497739 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
PTPN3-206ENST00000497739 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
PTPN3-206ENST00000497739 CAMK2N2Q96S95 79 aa6.15□□□□□ -1.42
PTPN3-206ENST00000497739 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.42
PTPN3-206ENST00000497739 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
PTPN3-206ENST00000497739 SPAG11BQ08648 103 aa6.14□□□□□ -1.43
PTPN3-206ENST00000497739 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
PTPN3-206ENST00000497739 LINC00474Q9P2X8 69 aa6.14□□□□□ -1.43
PTPN3-206ENST00000497739 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
PTPN3-206ENST00000497739 PRSS2P07478 247 aa6.13□□□□□ -1.43
PTPN3-206ENST00000497739 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
PTPN3-206ENST00000497739 RAB5BP61020 215 aa6.13□□□□□ -1.43
PTPN3-206ENST00000497739 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
PTPN3-206ENST00000497739 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
PTPN3-206ENST00000497739 PACRGQ96M98 296 aaPredicted RBP6.13□□□□□ -1.43
PTPN3-206ENST00000497739 SCGB3A1Q96QR1 104 aa6.13□□□□□ -1.43
PTPN3-206ENST00000497739 OPRPNQ99935 248 aaPredicted RBP6.13□□□□□ -1.43
PTPN3-206ENST00000497739 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
PTPN3-206ENST00000497739 IGLV4-69A0A075B6H9 119 aa6.12□□□□□ -1.43
PTPN3-206ENST00000497739 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
PTPN3-206ENST00000497739 COX6A2Q02221 97 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms