RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LINC00242Q5T6M2 205 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 PIMREGQ9BSJ6 248 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 IGHV3-53P01767 116 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 Q5XG85 94 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 RBMY1A1P0DJD3 496 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 RBMY1CP0DJD4 496 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 RBMY1FQ15415 496 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 FAM222AQ5U5X8 452 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 SMIM1B2RUZ4 78 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 PFN2P35080 140 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 Q6JHZ5 121 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 PKIGQ9Y2B9 76 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 ANKRD17O75179 2603 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 WIPF1O43516 503 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 SMIM11BQ8TCY0 68 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 UPK3BQ9BT76 320 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 FBN2P35556 2912 aa9.42□□□□□ -0.9
GAPVD1-220ENST00000497580 K7ENP7 123 aa9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 CFHR3Q02985 330 aa9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 PAX4O43316 350 aa9.41□□□□□ -0.9
GAPVD1-220ENST00000497580 ENHOQ6UWT2 76 aa9.4□□□□□ -0.9
GAPVD1-220ENST00000497580 CHD6Q8TD26 2715 aa9.4□□□□□ -0.91
GAPVD1-220ENST00000497580 NF1P21359 2839 aa9.39□□□□□ -0.91
GAPVD1-220ENST00000497580 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-220ENST00000497580 DEFB131AP59861 70 aa9.39□□□□□ -0.91
GAPVD1-220ENST00000497580 KLK9Q2XQG4 91 aa9.38□□□□□ -0.91
GAPVD1-220ENST00000497580 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
GAPVD1-220ENST00000497580 CFAP46Q8IYW2 2715 aa9.38□□□□□ -0.91
GAPVD1-220ENST00000497580 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
GAPVD1-220ENST00000497580 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
GAPVD1-220ENST00000497580 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
GAPVD1-220ENST00000497580 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
GAPVD1-220ENST00000497580 ZNF462Q96JM2 2506 aa9.36□□□□□ -0.91
GAPVD1-220ENST00000497580 LMO4P61968 165 aa9.36□□□□□ -0.91
GAPVD1-220ENST00000497580 C19orf84I3L1E1 186 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 K7EQG2 157 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 C11orf44Q8N8P7 122 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 DEFB136Q30KP8 78 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 C11orf71Q6IPW1 123 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 NIPBLQ6KC79 2804 aaeCLIP9.35□□□□□ -0.915e-8■□□□□ 8.6
GAPVD1-220ENST00000497580 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
GAPVD1-220ENST00000497580 IGLV5-45A0A087WSX0 123 aa9.34□□□□□ -0.91
GAPVD1-220ENST00000497580 PRB1P04280 392 aa9.34□□□□□ -0.91
GAPVD1-220ENST00000497580 Q96MF0 132 aa9.34□□□□□ -0.91
GAPVD1-220ENST00000497580 UBE2L6O14933 153 aa9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 PRORYQ9H606 182 aa9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 NBEAL2Q6ZNJ1 2754 aa9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-220ENST00000497580 TEX15Q9BXT5 2789 aa9.32□□□□□ -0.92
GAPVD1-220ENST00000497580 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
GAPVD1-220ENST00000497580 XCL1P47992 114 aa9.32□□□□□ -0.92
GAPVD1-220ENST00000497580 CCL18P55774 89 aa9.32□□□□□ -0.92
GAPVD1-220ENST00000497580 XCL2Q9UBD3 114 aa9.32□□□□□ -0.92
GAPVD1-220ENST00000497580 GNLYP22749 145 aa9.32□□□□□ -0.92
GAPVD1-220ENST00000497580 J3QLI3 93 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 UBE2E2Q96LR5 201 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 MXRA5Q9NR99 2828 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 H0YGX0 51 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 K7EMT4 169 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 MRAPQ8TCY5 172 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 COX7B2Q8TF08 81 aa9.31□□□□□ -0.92
GAPVD1-220ENST00000497580 NDUFC2O95298 119 aa9.3□□□□□ -0.92
GAPVD1-220ENST00000497580 IGHV4-59P01825 116 aa9.3□□□□□ -0.92
GAPVD1-220ENST00000497580 DOPEY1Q5JWR5 2465 aa9.3□□□□□ -0.92
GAPVD1-220ENST00000497580 PF4P02776 101 aa9.3□□□□□ -0.92
GAPVD1-220ENST00000497580 PSMB8P28062 276 aa9.3□□□□□ -0.92
GAPVD1-220ENST00000497580 HAMPP81172 84 aa9.3□□□□□ -0.92
GAPVD1-220ENST00000497580 CCL19Q99731 98 aa9.29□□□□□ -0.92
GAPVD1-220ENST00000497580 UBL5Q9BZL1 73 aa9.29□□□□□ -0.92
GAPVD1-220ENST00000497580 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
GAPVD1-220ENST00000497580 H3BUA1 57 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 CCKP06307 115 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 NBL1P41271 181 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 Q6ZTI0 123 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 RBM3P98179 157 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 S100A7L2Q5SY68 101 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 BRK1Q8WUW1 75 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 RMI2Q96E14 147 aa9.28□□□□□ -0.92
GAPVD1-220ENST00000497580 PRO0628Q9UI54 55 aa9.27□□□□□ -0.93
GAPVD1-220ENST00000497580 IGLV1-40P01703 118 aa9.27□□□□□ -0.93
GAPVD1-220ENST00000497580 UCNP55089 124 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms