RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 GEMIN7Q9H840 131 aaKnown RBP13.1□□□□□ -0.31
SCAMP3-209ENST00000497470 CHTOPQ9Y3Y2 248 aaKnown RBP13.1□□□□□ -0.31
SCAMP3-209ENST00000497470 DNAH6Q9C0G6 4158 aa13.09□□□□□ -0.31
SCAMP3-209ENST00000497470 GAGE12HA6NDE8 117 aa13.09□□□□□ -0.31
SCAMP3-209ENST00000497470 COX7A2LO14548 114 aa13.09□□□□□ -0.31
SCAMP3-209ENST00000497470 XCL1P47992 114 aa13.09□□□□□ -0.31
SCAMP3-209ENST00000497470 ZC2HC1BQ5TFG8 222 aa13.09□□□□□ -0.31
SCAMP3-209ENST00000497470 IGLV4-69A0A075B6H9 119 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 A0A0J9YXV3 536 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 RTL8CO15255 209 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 PLNP26678 52 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 C14orf177Q52M58 125 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 LINC01545Q5VT33 79 aa13.08□□□□□ -0.32
SCAMP3-209ENST00000497470 APOMO95445 188 aa13.07□□□□□ -0.32
SCAMP3-209ENST00000497470 MAPKAPK5-AS1Q8N8E1 139 aa13.07□□□□□ -0.32
SCAMP3-209ENST00000497470 IGHV1-58A0A0C4DH39 117 aa13.06□□□□□ -0.32
SCAMP3-209ENST00000497470 LRCOL1A6NCL2 159 aa13.06□□□□□ -0.32
SCAMP3-209ENST00000497470 COX6A2Q02221 97 aa13.06□□□□□ -0.32
SCAMP3-209ENST00000497470 MRPL35Q9NZE8 188 aaKnown RBP13.06□□□□□ -0.32
SCAMP3-209ENST00000497470 KMT2AQ03164 3969 aa13.05□□□□□ -0.32
SCAMP3-209ENST00000497470 C20orf202A1L168 122 aa13.05□□□□□ -0.32
SCAMP3-209ENST00000497470 F8WDY8 70 aa13.05□□□□□ -0.32
SCAMP3-209ENST00000497470 H3BRM9 83 aa13.05□□□□□ -0.32
SCAMP3-209ENST00000497470 CHAC1Q9BUX1 264 aa13.05□□□□□ -0.32
SCAMP3-209ENST00000497470 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
SCAMP3-209ENST00000497470 C11orf86A6NJI1 115 aa13.03□□□□□ -0.32
SCAMP3-209ENST00000497470 DPM2O94777 84 aa13.03□□□□□ -0.32
SCAMP3-209ENST00000497470 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
SCAMP3-209ENST00000497470 TMA7Q9Y2S6 64 aaKnown RBP13.03□□□□□ -0.32
SCAMP3-209ENST00000497470 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.33
SCAMP3-209ENST00000497470 A0A087WTM6 91 aa13.02□□□□□ -0.33
SCAMP3-209ENST00000497470 EREGO14944 169 aa13.02□□□□□ -0.33
SCAMP3-209ENST00000497470 MALP21145 153 aa13.02□□□□□ -0.33
SCAMP3-209ENST00000497470 KRTDAPP60985 99 aa13.02□□□□□ -0.33
SCAMP3-209ENST00000497470 LINC00469Q8N7U9 141 aa13.02□□□□□ -0.33
SCAMP3-209ENST00000497470 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
SCAMP3-209ENST00000497470 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
SCAMP3-209ENST00000497470 C5orf38Q86SI9 138 aa13.01□□□□□ -0.33
SCAMP3-209ENST00000497470 USP17L23D6RBM5 183 aa13□□□□□ -0.33
SCAMP3-209ENST00000497470 IGKCP01834 107 aa13□□□□□ -0.33
SCAMP3-209ENST00000497470 C15orf56Q8N910 161 aa12.99□□□□□ -0.33
SCAMP3-209ENST00000497470 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
SCAMP3-209ENST00000497470 IGLV5-39A0A0G2JS06 123 aa12.98□□□□□ -0.33
SCAMP3-209ENST00000497470 H0Y8G0 127 aa12.98□□□□□ -0.33
SCAMP3-209ENST00000497470 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
SCAMP3-209ENST00000497470 C2orf48Q96LS8 159 aa12.98□□□□□ -0.33
SCAMP3-209ENST00000497470 KMT2CQ8NEZ4 4911 aaKnown RBP12.97□□□□□ -0.33
SCAMP3-209ENST00000497470 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
SCAMP3-209ENST00000497470 TMEM170BQ5T4T1 132 aa12.97□□□□□ -0.33
SCAMP3-209ENST00000497470 Q8IZM0 81 aa12.97□□□□□ -0.33
SCAMP3-209ENST00000497470 TMEM223A0PJW6 202 aa12.96□□□□□ -0.33
SCAMP3-209ENST00000497470 TNP2Q05952 138 aa12.96□□□□□ -0.33
SCAMP3-209ENST00000497470 SFTA2Q6UW10 78 aa12.96□□□□□ -0.33
SCAMP3-209ENST00000497470 Q8N814 137 aa12.96□□□□□ -0.33
SCAMP3-209ENST00000497470 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
SCAMP3-209ENST00000497470 CXCL5P42830 114 aa12.94□□□□□ -0.34
SCAMP3-209ENST00000497470 HERVK_113P61574 105 aa12.94□□□□□ -0.34
SCAMP3-209ENST00000497470 CNBPP62633 177 aaKnown RBP12.94□□□□□ -0.34
SCAMP3-209ENST00000497470 KIAA0087Q14695 138 aa12.94□□□□□ -0.34
SCAMP3-209ENST00000497470 CDPF1Q6NVV7 123 aa12.94□□□□□ -0.34
SCAMP3-209ENST00000497470 ORAOV1Q8WV07 137 aa12.93□□□□□ -0.34
SCAMP3-209ENST00000497470 PGPEP1Q9NXJ5 209 aa12.93□□□□□ -0.34
SCAMP3-209ENST00000497470 WFDC2Q14508 124 aa12.92□□□□□ -0.34
SCAMP3-209ENST00000497470 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
SCAMP3-209ENST00000497470 SPAG11BQ08648 103 aa12.91□□□□□ -0.34
SCAMP3-209ENST00000497470 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
SCAMP3-209ENST00000497470 hDV102S1A0JD36 115 aa12.9□□□□□ -0.34
SCAMP3-209ENST00000497470 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
SCAMP3-209ENST00000497470 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 E9PLD3 99 aa12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 PRSS2P07478 247 aa12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 C6orf226Q5I0X4 101 aa12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 PLEKHB2Q96CS7 222 aa12.89□□□□□ -0.35
SCAMP3-209ENST00000497470 PKIGQ9Y2B9 76 aa12.88□□□□□ -0.35
SCAMP3-209ENST00000497470 A0A1B0GVY2 172 aa12.87□□□□□ -0.35
SCAMP3-209ENST00000497470 LECT2O14960 151 aa12.87□□□□□ -0.35
SCAMP3-209ENST00000497470 LEPROTO15243 131 aa12.87□□□□□ -0.35
SCAMP3-209ENST00000497470 RYR2Q92736 4967 aa12.87□□□□□ -0.35
SCAMP3-209ENST00000497470 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
SCAMP3-209ENST00000497470 NDUFA1O15239 70 aa12.86□□□□□ -0.35
SCAMP3-209ENST00000497470 SCGB1D1O95968 90 aa12.86□□□□□ -0.35
SCAMP3-209ENST00000497470 HYDINQ4G0P3 5121 aa12.85□□□□□ -0.35
SCAMP3-209ENST00000497470 NMUP48645 174 aa12.85□□□□□ -0.35
SCAMP3-209ENST00000497470 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
SCAMP3-209ENST00000497470 HIGD2BQ4VC39 106 aa12.85□□□□□ -0.35
SCAMP3-209ENST00000497470 C9orf163Q8N9P6 203 aa12.85□□□□□ -0.35
SCAMP3-209ENST00000497470 CKS1BP61024 79 aa12.84□□□□□ -0.35
SCAMP3-209ENST00000497470 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
SCAMP3-209ENST00000497470 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
SCAMP3-209ENST00000497470 SLPIP03973 132 aa12.83□□□□□ -0.36
SCAMP3-209ENST00000497470 TOMM7Q9P0U1 55 aa12.83□□□□□ -0.36
SCAMP3-209ENST00000497470 HERV-K104P63124 156 aa12.82□□□□□ -0.36
SCAMP3-209ENST00000497470 ZNF625Q96I27 306 aaPredicted RBP12.82□□□□□ -0.36
SCAMP3-209ENST00000497470 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
SCAMP3-209ENST00000497470 J3QQQ9 107 aa12.81□□□□□ -0.36
SCAMP3-209ENST00000497470 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
SCAMP3-209ENST00000497470 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms