RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 FAM19A3Q7Z5A8 133 aa6.86□□□□□ -1.31
SHROOM3-210ENST00000497440 LINC00526Q96FQ7 95 aa6.86□□□□□ -1.31
SHROOM3-210ENST00000497440 CARHSP1Q9Y2V2 147 aaKnown RBP6.86□□□□□ -1.31
SHROOM3-210ENST00000497440 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 A0A096LNI7 61 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 TRAV13-1A0A0B4J241 112 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 F8WDY8 70 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 OXTP01178 125 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 AMELXQ99217 191 aa6.85□□□□□ -1.31
SHROOM3-210ENST00000497440 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 RAB5AP20339 215 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 KIAA0087Q14695 138 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 LINC00173Q6ZV60 143 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 CARD19Q96LW7 228 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 GNB1LQ9BYB4 327 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 MAP1LC3AQ9H492 121 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 LINC00474Q9P2X8 69 aa6.84□□□□□ -1.31
SHROOM3-210ENST00000497440 A0A087WZ39 114 aa6.83□□□□□ -1.32
SHROOM3-210ENST00000497440 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
SHROOM3-210ENST00000497440 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
SHROOM3-210ENST00000497440 Q6ZRU5 148 aa6.83□□□□□ -1.32
SHROOM3-210ENST00000497440 NXT2Q9NPJ8 142 aaKnown RBP6.83□□□□□ -1.32
SHROOM3-210ENST00000497440 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
SHROOM3-210ENST00000497440 LOC389332A0A1B0GUA5 103 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 APOMO95445 188 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 TLX1NBP0CAT3 122 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 UBE2D1P51668 147 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 ORMDL2Q53FV1 153 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 C2orf66Q6UXQ4 117 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
SHROOM3-210ENST00000497440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.81□□□□□ -1.32
SHROOM3-210ENST00000497440 MALP21145 153 aa6.81□□□□□ -1.32
SHROOM3-210ENST00000497440 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
SHROOM3-210ENST00000497440 COMMD7Q86VX2 200 aa6.81□□□□□ -1.32
SHROOM3-210ENST00000497440 STPG4Q8N801 248 aa6.81□□□□□ -1.32
SHROOM3-210ENST00000497440 CYSLTR1Q9Y271 337 aa6.81□□□□□ -1.32
SHROOM3-210ENST00000497440 IFITM10A6NMD0 228 aa6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 RHEBQ15382 184 aa6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 MAJINQ3KP22 176 aa6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 COX19Q49B96 90 aa6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
SHROOM3-210ENST00000497440 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 A0A1W2PNN7 141 aa6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 MT1HL1P0DM35 61 aa6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 G0S2P27469 103 aa6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 SRSF9Q13242 221 aaKnown RBP eCLIP6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 CAMK2N2Q96S95 79 aa6.79□□□□□ -1.32
SHROOM3-210ENST00000497440 MT-ND6P03923 174 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 KIAA1644Q3SXP7 199 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 TEX43Q6ZNM6 134 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 ERASQ7Z444 233 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 DPH3Q96FX2 82 aa6.78□□□□□ -1.32
SHROOM3-210ENST00000497440 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 LINC01549A6NIU2 74 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 ODF1Q14990 250 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 ZC2HC1BQ5TFG8 222 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 ORAOV1Q8WV07 137 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 VCX2Q9H322 139 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 C6orf48Q9UBA6 75 aa6.77□□□□□ -1.33
SHROOM3-210ENST00000497440 TGIF2-C20orf24A0A0A6YYL0 155 aa6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 J3QL48 77 aa6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 S100PP25815 95 aa6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 PRR3P79522 188 aaKnown RBP6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 UNQ6190/PRO20217Q6UXQ8 127 aa6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 YPEL4Q96NS1 127 aa6.76□□□□□ -1.33
SHROOM3-210ENST00000497440 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
SHROOM3-210ENST00000497440 NDUFA1O15239 70 aa6.75□□□□□ -1.33
SHROOM3-210ENST00000497440 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
SHROOM3-210ENST00000497440 Q6ZRP5 223 aa6.75□□□□□ -1.33
SHROOM3-210ENST00000497440 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
SHROOM3-210ENST00000497440 URB1-AS1Q96HZ7 61 aa6.75□□□□□ -1.33
SHROOM3-210ENST00000497440 A0A096LNJ9 63 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 GAGE2BQ13066 116 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 C9orf116Q5BN46 136 aaPredicted RBP6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 Q6ZN92 141 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 RPS10P5Q9NQ39 176 aa6.74□□□□□ -1.33
SHROOM3-210ENST00000497440 HERVK_113P63121 156 aa6.73□□□□□ -1.33
SHROOM3-210ENST00000497440 SEC11AP67812 179 aa6.73□□□□□ -1.33
SHROOM3-210ENST00000497440 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
SHROOM3-210ENST00000497440 LRP2P98164 4655 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms