RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 S100PP25815 95 aa11.84□□□□□ -0.51
RPN1-208ENST00000497415 RPL37AP61513 92 aaKnown RBP11.84□□□□□ -0.51
RPN1-208ENST00000497415 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
RPN1-208ENST00000497415 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
RPN1-208ENST00000497415 PKIGQ9Y2B9 76 aa11.84□□□□□ -0.51
RPN1-208ENST00000497415 IFITM10A6NMD0 228 aa11.83□□□□□ -0.52
RPN1-208ENST00000497415 C2orf66Q6UXQ4 117 aa11.83□□□□□ -0.52
RPN1-208ENST00000497415 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
RPN1-208ENST00000497415 GNB1LQ9BYB4 327 aa11.83□□□□□ -0.52
RPN1-208ENST00000497415 CYSLTR1Q9Y271 337 aa11.83□□□□□ -0.52
RPN1-208ENST00000497415 A0A096LNI7 61 aa11.82□□□□□ -0.52
RPN1-208ENST00000497415 RHEBQ15382 184 aa11.82□□□□□ -0.52
RPN1-208ENST00000497415 KIAA1644Q3SXP7 199 aa11.82□□□□□ -0.52
RPN1-208ENST00000497415 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
RPN1-208ENST00000497415 DMBT1Q9UGM3 2413 aaPredicted RBP11.82□□□□□ -0.52
RPN1-208ENST00000497415 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
RPN1-208ENST00000497415 MAJINQ3KP22 176 aa11.81□□□□□ -0.52
RPN1-208ENST00000497415 Q6ZRU5 148 aa11.81□□□□□ -0.52
RPN1-208ENST00000497415 NPSP0C0P6 89 aa11.8□□□□□ -0.52
RPN1-208ENST00000497415 COX19Q49B96 90 aa11.8□□□□□ -0.52
RPN1-208ENST00000497415 OR10D4PQ8NGN7 298 aa11.8□□□□□ -0.52
RPN1-208ENST00000497415 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
RPN1-208ENST00000497415 KRTAP29-1A8MX34 341 aaPredicted RBP11.79□□□□□ -0.52
RPN1-208ENST00000497415 SPAG11BQ08648 103 aa11.79□□□□□ -0.52
RPN1-208ENST00000497415 LINC00242Q5T6M2 205 aa11.79□□□□□ -0.52
RPN1-208ENST00000497415 CAMK2N2Q96S95 79 aa11.79□□□□□ -0.52
RPN1-208ENST00000497415 RPS10P5Q9NQ39 176 aa11.79□□□□□ -0.52
RPN1-208ENST00000497415 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
RPN1-208ENST00000497415 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
RPN1-208ENST00000497415 TEX43Q6ZNM6 134 aa11.78□□□□□ -0.52
RPN1-208ENST00000497415 LINC00173Q6ZV60 143 aa11.78□□□□□ -0.52
RPN1-208ENST00000497415 STPG4Q8N801 248 aa11.78□□□□□ -0.52
RPN1-208ENST00000497415 AMELXQ99217 191 aa11.78□□□□□ -0.52
RPN1-208ENST00000497415 A0A087WZ39 114 aa11.77□□□□□ -0.53
RPN1-208ENST00000497415 TGIF2-C20orf24A0A0A6YYL0 155 aa11.77□□□□□ -0.53
RPN1-208ENST00000497415 F8WDY8 70 aa11.77□□□□□ -0.53
RPN1-208ENST00000497415 G0S2P27469 103 aa11.77□□□□□ -0.53
RPN1-208ENST00000497415 UBE2D1P51668 147 aa11.77□□□□□ -0.53
RPN1-208ENST00000497415 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.53
RPN1-208ENST00000497415 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.53
RPN1-208ENST00000497415 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
RPN1-208ENST00000497415 MT-ND6P03923 174 aa11.76□□□□□ -0.53
RPN1-208ENST00000497415 HNRNPA3P51991 378 aaKnown RBP11.76□□□□□ -0.53
RPN1-208ENST00000497415 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
RPN1-208ENST00000497415 Q6ZN92 141 aa11.76□□□□□ -0.53
RPN1-208ENST00000497415 HERC1Q15751 4861 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 PTTG1IPP53801 180 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 ZC2HC1BQ5TFG8 222 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 FAM19A3Q7Z5A8 133 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 TOMM6Q96B49 74 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 C2orf88Q9BSF0 95 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 VCX2Q9H322 139 aa11.75□□□□□ -0.53
RPN1-208ENST00000497415 LINC01561Q8N1V8 128 aa11.74□□□□□ -0.53
RPN1-208ENST00000497415 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
RPN1-208ENST00000497415 MRPL18Q9H0U6 180 aaKnown RBP11.74□□□□□ -0.53
RPN1-208ENST00000497415 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
RPN1-208ENST00000497415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.73□□□□□ -0.53
RPN1-208ENST00000497415 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
RPN1-208ENST00000497415 J3QL48 77 aa11.72□□□□□ -0.53
RPN1-208ENST00000497415 APOC3P02656 99 aa11.72□□□□□ -0.53
RPN1-208ENST00000497415 FABP9Q0Z7S8 132 aa11.72□□□□□ -0.53
RPN1-208ENST00000497415 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
RPN1-208ENST00000497415 KIAA0087Q14695 138 aa11.72□□□□□ -0.53
RPN1-208ENST00000497415 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
RPN1-208ENST00000497415 NDUFA1O15239 70 aa11.71□□□□□ -0.53
RPN1-208ENST00000497415 OXTP01178 125 aa11.71□□□□□ -0.53
RPN1-208ENST00000497415 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.54
RPN1-208ENST00000497415 FAT3Q8TDW7 4589 aa11.7□□□□□ -0.54
RPN1-208ENST00000497415 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
RPN1-208ENST00000497415 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
RPN1-208ENST00000497415 C10orf25Q5T742 122 aa11.7□□□□□ -0.54
RPN1-208ENST00000497415 ERASQ7Z444 233 aa11.7□□□□□ -0.54
RPN1-208ENST00000497415 SVBPQ8N300 66 aa11.7□□□□□ -0.54
RPN1-208ENST00000497415 SNAPINO95295 136 aa11.69□□□□□ -0.54
RPN1-208ENST00000497415 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
RPN1-208ENST00000497415 NDUFA5Q16718 116 aa11.68□□□□□ -0.54
RPN1-208ENST00000497415 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
RPN1-208ENST00000497415 C6orf48Q9UBA6 75 aa11.68□□□□□ -0.54
RPN1-208ENST00000497415 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
RPN1-208ENST00000497415 SEC11AP67812 179 aa11.67□□□□□ -0.54
RPN1-208ENST00000497415 RPL18AQ02543 176 aaKnown RBP11.67□□□□□ -0.54
RPN1-208ENST00000497415 A0A1W2PNN7 141 aa11.66□□□□□ -0.54
RPN1-208ENST00000497415 HERVK_113P63121 156 aa11.66□□□□□ -0.54
RPN1-208ENST00000497415 FA2HQ7L5A8 372 aa11.66□□□□□ -0.54
RPN1-208ENST00000497415 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
RPN1-208ENST00000497415 PRR3P79522 188 aaKnown RBP11.65□□□□□ -0.54
RPN1-208ENST00000497415 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.54
RPN1-208ENST00000497415 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.54
RPN1-208ENST00000497415 TRBV30A0A0K0K1B3 111 aa11.64□□□□□ -0.55
RPN1-208ENST00000497415 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
RPN1-208ENST00000497415 SMCO4Q9NRQ5 59 aa11.64□□□□□ -0.55
RPN1-208ENST00000497415 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
RPN1-208ENST00000497415 Q6ZRP5 223 aa11.63□□□□□ -0.55
RPN1-208ENST00000497415 C18orf32Q8TCD1 76 aa11.63□□□□□ -0.55
RPN1-208ENST00000497415 CDKN2A-AS1Q9UH64 79 aa11.63□□□□□ -0.55
RPN1-208ENST00000497415 Q8IZM0 81 aa11.62□□□□□ -0.55
RPN1-208ENST00000497415 URB1-AS1Q96HZ7 61 aa11.62□□□□□ -0.55
RPN1-208ENST00000497415 YPEL4Q96NS1 127 aa11.62□□□□□ -0.55
RPN1-208ENST00000497415 GEMIN7Q9H840 131 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms