RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 SHANK2-AS3Q9BTD1 123 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 DNAH9Q9NYC9 4486 aa4.82□□□□□ -1.64
HOXA9-206ENST00000497089 A0A0J9YX75 114 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 C11orf86A6NJI1 115 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 H3BRN7 92 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 IGHV4-30-4P0DP06 118 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
HOXA9-206ENST00000497089 LYZP61626 148 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 ERCC8Q13216 396 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 GPHB5Q86YW7 130 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 TM2D3Q9BRN9 247 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 SLC50A1Q9BRV3 221 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 SMIM2Q9BVW6 85 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 V9GYY9 64 aa4.81□□□□□ -1.64
HOXA9-206ENST00000497089 TRBV7-1A0A0A6YYK4 115 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 TRAV13-1A0A0B4J241 112 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 C3orf84H3BNL1 204 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 H3BTX0 84 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 HIST1H4AP62805 103 aaKnown RBP4.8□□□□□ -1.64
HOXA9-206ENST00000497089 WT1-ASQ06250 92 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 DEFB114Q30KQ6 69 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 APRG1Q8IVJ8 170 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 NRACQ8N912 160 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 COPS9Q8WXC6 57 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
HOXA9-206ENST00000497089 IGHV4-4A0A075B6R2 117 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 TINCRA0A1B0GVN0 87 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 SDHAF1A6NFY7 115 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 H7C423 109 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 M0R381 172 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 NDUFC2O95298 119 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 ZNF415Q09FC8 603 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 CLEC19AQ6UXS0 136 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 LINC00336Q6ZUF6 198 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 SERP2Q8N6R1 65 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 DAND5Q8N907 189 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 EEF1AKMT3Q96AZ1 226 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 C2orf48Q96LS8 159 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 JPT2Q9H910 190 aa4.79□□□□□ -1.64
HOXA9-206ENST00000497089 M0R3E3 92 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 LST1O00453 97 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 LEPROTO15243 131 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 INAFM2P0DMQ5 153 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 RPL18AQ02543 176 aaKnown RBP4.78□□□□□ -1.64
HOXA9-206ENST00000497089 Q5XG85 94 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 SDIM1Q6ZPB5 146 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 AGPAT4-IT1Q9H0P7 198 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 KLK5Q9Y337 293 aaPredicted RBP4.78□□□□□ -1.64
HOXA9-206ENST00000497089 ICOSQ9Y6W8 199 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 hADV29S1A0JD25 119 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 TMEM223A0PJW6 202 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 J3QQQ9 107 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 VPREB1P12018 145 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 C2orf66Q6UXQ4 117 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 DYNLRB2Q8TF09 96 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 MRPL36Q9P0J6 103 aaKnown RBP4.78□□□□□ -1.64
HOXA9-206ENST00000497089 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 S4R3C0 116 aa4.78□□□□□ -1.64
HOXA9-206ENST00000497089 K7EIM0 57 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 K7EMT4 169 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 VCYO14598 125 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 IGHV3-23P01764 117 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 NPC2P61916 151 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 C4orf26Q17RF5 130 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 CASC10Q5T4H9 136 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 UNQ9165/PRO28630Q6UXU0 137 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 TIMM17AQ99595 171 aa4.77□□□□□ -1.65
HOXA9-206ENST00000497089 KMT2CQ8NEZ4 4911 aaKnown RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 RBMY1BA6NDE4 496 aaKnown RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 RBMY1EA6NEQ0 496 aaKnown RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 H7C2G1 150 aa4.76□□□□□ -1.65
HOXA9-206ENST00000497089 NDUFA4O00483 81 aa4.76□□□□□ -1.65
HOXA9-206ENST00000497089 CTSGP08311 255 aa4.76□□□□□ -1.65
HOXA9-206ENST00000497089 RBMY1DP0C7P1 496 aaKnown RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 GATA1P15976 413 aaPredicted RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 PFN2P35080 140 aa4.76□□□□□ -1.65
HOXA9-206ENST00000497089 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 CEMP1Q6PRD7 247 aaPredicted RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 MRPL53Q96EL3 112 aaKnown RBP4.76□□□□□ -1.65
HOXA9-206ENST00000497089 C9orf85Q96MD7 179 aa4.76□□□□□ -1.65
HOXA9-206ENST00000497089 SERP1Q9Y6X1 66 aa4.76□□□□□ -1.65
HOXA9-206ENST00000497089 TRAV12-2A0A075B6T6 113 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 I3L2K1 104 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 IGHV3-48P01763 117 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 ODF3L2Q3SX64 289 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 FAM222AQ5U5X8 452 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 SPANXN1Q5VSR9 72 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 Q6JHZ5 121 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 DCANP1Q8TF63 244 aa4.75□□□□□ -1.65
HOXA9-206ENST00000497089 DAZ1Q9NQZ3 744 aaKnown RBP4.75□□□□□ -1.65
HOXA9-206ENST00000497089 IGLV4-69A0A075B6H9 119 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 IGHV4-28A0A0C4DH34 117 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 GAS8-AS1O95177 125 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms