RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PCOTHQ58A44 107 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 PRO1933Q9H354 126 aa2.01□□□□□ -2.09
SNX13-211ENST00000496855 CLIP1P30622 1438 aa2□□□□□ -2.09
SNX13-211ENST00000496855 NF1P21359 2839 aa2□□□□□ -2.09
SNX13-211ENST00000496855 NHSQ6T4R5 1651 aa2□□□□□ -2.09
SNX13-211ENST00000496855 XRN1Q8IZH2 1706 aaKnown RBP2□□□□□ -2.09
SNX13-211ENST00000496855 SPTA1P02549 2419 aa2□□□□□ -2.09
SNX13-211ENST00000496855 TLN1Q9Y490 2541 aaKnown RBP2□□□□□ -2.09
SNX13-211ENST00000496855 PHIPQ8WWQ0 1821 aa2□□□□□ -2.09
SNX13-211ENST00000496855 TRAV23DV6A0A075B6W5 121 aa2□□□□□ -2.09
SNX13-211ENST00000496855 NBDYA0A0U1RRE5 68 aa2□□□□□ -2.09
SNX13-211ENST00000496855 SSSCA1O60232 199 aa2□□□□□ -2.09
SNX13-211ENST00000496855 MRPS14O60783 128 aaKnown RBP2□□□□□ -2.09
SNX13-211ENST00000496855 CCL8P80075 99 aa2□□□□□ -2.09
SNX13-211ENST00000496855 DEFB103AP81534 67 aa2□□□□□ -2.09
SNX13-211ENST00000496855 Q0VG73 95 aa2□□□□□ -2.09
SNX13-211ENST00000496855 PYY3Q5JQD4 70 aa2□□□□□ -2.09
SNX13-211ENST00000496855 LINC00322Q6ZN03 302 aaPredicted RBP2□□□□□ -2.09
SNX13-211ENST00000496855 SMIM5Q71RC9 77 aa2□□□□□ -2.09
SNX13-211ENST00000496855 NDUFA11Q86Y39 141 aa2□□□□□ -2.09
SNX13-211ENST00000496855 ZGRF1Q86YA3 2104 aa2□□□□□ -2.09
SNX13-211ENST00000496855 FAM213BQ8TBF2 198 aa2□□□□□ -2.09
SNX13-211ENST00000496855 AMELYQ99218 206 aa2□□□□□ -2.09
SNX13-211ENST00000496855 VAMP8Q9BV40 100 aa2□□□□□ -2.09
SNX13-211ENST00000496855 V9GYS6 101 aa2□□□□□ -2.09
SNX13-211ENST00000496855 IGSF10Q6WRI0 2623 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 EIF2AK4Q9P2K8 1649 aaKnown RBP1.99□□□□□ -2.09
SNX13-211ENST00000496855 DOCK1Q14185 1865 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 PCNX1Q96RV3 2341 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 CREBBPQ92793 2442 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 H3BQ15 152 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 J3QRE1 110 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 GNGT2O14610 69 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 CYSTM1Q9H1C7 97 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 Q9H521 79 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 FAIMQ9NVQ4 179 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 LRRC37A2A6NM11 1700 aa1.99□□□□□ -2.09
SNX13-211ENST00000496855 SDK1Q7Z5N4 2213 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 INTS1Q8N201 2190 aaKnown RBP1.98□□□□□ -2.09
SNX13-211ENST00000496855 PATJQ8NI35 1801 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 TJP1Q07157 1748 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 TEX49A0A1B0GTD5 131 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 SIX6O95475 246 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 ATP5EP56381 51 aaPredicted RBP1.98□□□□□ -2.09
SNX13-211ENST00000496855 NPVFQ9HCQ7 196 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 WDFY3Q8IZQ1 3526 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 NBEAL1Q6ZS30 2694 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 ESPL1Q14674 2120 aa1.98□□□□□ -2.09
SNX13-211ENST00000496855 PDZD2O15018 2839 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 NBEAL2Q6ZNJ1 2754 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 FLNCQ14315 2725 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 NOTCH1P46531 2555 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 CACNA1HO95180 2353 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 ANKRD36BQ8N2N9 1353 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 IGKV3D-7A0A0C4DH55 119 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 KRTAP12-1P59990 96 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 RPL37AP61513 92 aaKnown RBP1.97□□□□□ -2.09
SNX13-211ENST00000496855 TMEM14CQ9P0S9 112 aa1.97□□□□□ -2.09
SNX13-211ENST00000496855 NSD3Q9BZ95 1437 aa1.96□□□□□ -2.09
SNX13-211ENST00000496855 CHD7Q9P2D1 2997 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 HIGD1CA8MV81 97 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 LINC00032P0C843 101 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 FXYD4P59646 89 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 SCP2D1Q9UJQ7 156 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 ALS2Q96Q42 1657 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 ATRQ13535 2644 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 JMJD1CQ15652 2540 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 CRYBG3Q68DQ2 2970 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 CDC42BPGQ6DT37 1551 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 PKD1L1Q8TDX9 2849 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 MYH8P13535 1937 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 WNK3Q9BYP7 1800 aa1.96□□□□□ -2.1
SNX13-211ENST00000496855 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
SNX13-211ENST00000496855 GNG11P61952 73 aa1.95□□□□□ -2.1
SNX13-211ENST00000496855 MON2Q7Z3U7 1717 aa1.95□□□□□ -2.1
SNX13-211ENST00000496855 CRYBG1Q9Y4K1 1723 aa1.95□□□□□ -2.1
SNX13-211ENST00000496855 STAB1Q9NY15 2570 aa1.95□□□□□ -2.1
SNX13-211ENST00000496855 CCDC168Q8NDH2 2452 aa1.95□□□□□ -2.1
SNX13-211ENST00000496855 DMXL2Q8TDJ6 3036 aa1.95□□□□□ -2.1
SNX13-211ENST00000496855 FXYD3Q14802 87 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 C20orf197Q8N268 126 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 CYP4F30PQ9H0H9 118 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 AP4S1Q9Y587 144 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 DLEC1Q9Y238 1755 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 LY75O60449 1722 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 C5P01031 1676 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 SSC5DA1L4H1 1573 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 SPAG17Q6Q759 2223 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 PIGBOS1A0A0B4J2F0 54 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 SPATA45Q537H7 98 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 ZNF818PQ6ZRF7 136 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 CYP2G1PQ6ZSU1 146 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 PMCHL2Q9BQD1 86 aa1.94□□□□□ -2.1
SNX13-211ENST00000496855 KIF1AQ12756 1690 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 LRRK2Q5S007 2527 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms