RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
LMNA-216ENST00000496738 Q6Q795 121 aa11.79□□□□□ -0.52
LMNA-216ENST00000496738 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
LMNA-216ENST00000496738 PPDPFLQ8WWR9 84 aa11.79□□□□□ -0.52
LMNA-216ENST00000496738 ATP5LO75964 103 aa11.78□□□□□ -0.52
LMNA-216ENST00000496738 PRSS1P07477 247 aa11.78□□□□□ -0.52
LMNA-216ENST00000496738 TCTAP57738 103 aa11.78□□□□□ -0.52
LMNA-216ENST00000496738 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
LMNA-216ENST00000496738 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
LMNA-216ENST00000496738 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
LMNA-216ENST00000496738 LGALS9CQ6DKI2 356 aa11.78□□□□□ -0.52
LMNA-216ENST00000496738 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
LMNA-216ENST00000496738 F8WDY8 70 aa11.77□□□□□ -0.52
LMNA-216ENST00000496738 PCP2Q8IVA1 136 aa11.77□□□□□ -0.53
LMNA-216ENST00000496738 ZC2HC1BQ5TFG8 222 aa11.76□□□□□ -0.53
LMNA-216ENST00000496738 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
LMNA-216ENST00000496738 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
LMNA-216ENST00000496738 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
LMNA-216ENST00000496738 BAALCQ8WXS3 180 aa11.74□□□□□ -0.53
LMNA-216ENST00000496738 RNASE13Q5GAN3 156 aaKnown RBP11.74□□□□□ -0.53
LMNA-216ENST00000496738 TEN1Q86WV5 123 aa11.74□□□□□ -0.53
LMNA-216ENST00000496738 CEND1Q8N111 149 aa11.74□□□□□ -0.53
LMNA-216ENST00000496738 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
LMNA-216ENST00000496738 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
LMNA-216ENST00000496738 HUWE1Q7Z6Z7 4374 aaKnown RBP11.72□□□□□ -0.53
LMNA-216ENST00000496738 SNCGO76070 127 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
LMNA-216ENST00000496738 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 NMUP48645 174 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 TIMM17AQ99595 171 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 TMEM243Q9BU79 118 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 COL7A1Q02388 2944 aa11.72□□□□□ -0.53
LMNA-216ENST00000496738 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.53
LMNA-216ENST00000496738 TMEM141Q96I45 108 aa11.71□□□□□ -0.54
LMNA-216ENST00000496738 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
LMNA-216ENST00000496738 UBE2L6O14933 153 aa11.7□□□□□ -0.54
LMNA-216ENST00000496738 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
LMNA-216ENST00000496738 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
LMNA-216ENST00000496738 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
LMNA-216ENST00000496738 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
LMNA-216ENST00000496738 J3KT08 172 aa11.69□□□□□ -0.54
LMNA-216ENST00000496738 MRPL35Q9NZE8 188 aaKnown RBP11.69□□□□□ -0.54
LMNA-216ENST00000496738 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
LMNA-216ENST00000496738 A0A1B0GX51 115 aa11.68□□□□□ -0.54
LMNA-216ENST00000496738 IGKCP01834 107 aa11.68□□□□□ -0.54
LMNA-216ENST00000496738 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
LMNA-216ENST00000496738 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
LMNA-216ENST00000496738 DPM2O94777 84 aa11.67□□□□□ -0.54
LMNA-216ENST00000496738 OR13C6PQ8NH95 151 aa11.67□□□□□ -0.54
LMNA-216ENST00000496738 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
LMNA-216ENST00000496738 C9JAW5 83 aa11.67□□□□□ -0.54
LMNA-216ENST00000496738 PMVKQ15126 192 aa11.67□□□□□ -0.54
LMNA-216ENST00000496738 TMEM101Q96IK0 257 aa11.66□□□□□ -0.54
LMNA-216ENST00000496738 TAL2Q16559 108 aa11.66□□□□□ -0.54
LMNA-216ENST00000496738 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
LMNA-216ENST00000496738 F8VRH5 84 aa11.65□□□□□ -0.55
LMNA-216ENST00000496738 H3BNG1 76 aa11.65□□□□□ -0.55
LMNA-216ENST00000496738 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
LMNA-216ENST00000496738 TIMM21Q9BVV7 248 aa11.64□□□□□ -0.55
LMNA-216ENST00000496738 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
LMNA-216ENST00000496738 PLNP26678 52 aa11.63□□□□□ -0.55
LMNA-216ENST00000496738 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
LMNA-216ENST00000496738 Q8N3U1 123 aa11.63□□□□□ -0.55
LMNA-216ENST00000496738 AMELXQ99217 191 aa11.62□□□□□ -0.55
LMNA-216ENST00000496738 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
LMNA-216ENST00000496738 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
LMNA-216ENST00000496738 H7C423 109 aa11.61□□□□□ -0.55
LMNA-216ENST00000496738 IGKV2D-26A0A0A0MRZ7 120 aa11.61□□□□□ -0.55
LMNA-216ENST00000496738 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
LMNA-216ENST00000496738 STAB2Q8WWQ8 2551 aa11.61□□□□□ -0.55
LMNA-216ENST00000496738 IGKV3OR2-268A0A0C4DH90 116 aa11.6□□□□□ -0.55
LMNA-216ENST00000496738 A0A0J9YXV3 536 aa11.6□□□□□ -0.55
LMNA-216ENST00000496738 MRPS36P82909 103 aaKnown RBP11.6□□□□□ -0.55
LMNA-216ENST00000496738 LELP1Q5T871 98 aa11.6□□□□□ -0.55
LMNA-216ENST00000496738 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
LMNA-216ENST00000496738 PRKDCP78527 4128 aaKnown RBP11.6□□□□□ -0.55
LMNA-216ENST00000496738 ESRGQ1W209 222 aa11.59□□□□□ -0.55
LMNA-216ENST00000496738 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
LMNA-216ENST00000496738 TTTY13Q9BZ97 58 aa11.58□□□□□ -0.56
LMNA-216ENST00000496738 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
LMNA-216ENST00000496738 ANKRD29Q8N6D5 301 aa11.58□□□□□ -0.56
LMNA-216ENST00000496738 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
LMNA-216ENST00000496738 SPANXCQ9NY87 97 aa11.57□□□□□ -0.56
LMNA-216ENST00000496738 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
LMNA-216ENST00000496738 UBE2D1P51668 147 aa11.56□□□□□ -0.56
LMNA-216ENST00000496738 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
LMNA-216ENST00000496738 PSMB2P49721 201 aa11.55□□□□□ -0.56
LMNA-216ENST00000496738 HERVK_113P63121 156 aa11.55□□□□□ -0.56
LMNA-216ENST00000496738 IGHV3-30P01768 117 aa11.55□□□□□ -0.56
LMNA-216ENST00000496738 IGHV3-33P01772 117 aa11.55□□□□□ -0.56
LMNA-216ENST00000496738 IGHV3-30-3P0DP02 117 aa11.55□□□□□ -0.56
LMNA-216ENST00000496738 IGHV3-30-5P0DP03 117 aa11.55□□□□□ -0.56
LMNA-216ENST00000496738 A0A1B0GUV1 79 aa11.54□□□□□ -0.56
LMNA-216ENST00000496738 ANGP03950 147 aaKnown RBP11.54□□□□□ -0.56
LMNA-216ENST00000496738 TIRAPP58753 221 aa11.54□□□□□ -0.56
LMNA-216ENST00000496738 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
LMNA-216ENST00000496738 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms