RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 NTN5Q8WTR8 489 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-226ENST00000496026 CST9LQ9H4G1 147 aa9.69□□□□□ -0.86
HDAC9-226ENST00000496026 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
HDAC9-226ENST00000496026 hDV102S1A0JD36 115 aa9.68□□□□□ -0.86
HDAC9-226ENST00000496026 SEC11AP67812 179 aa9.68□□□□□ -0.86
HDAC9-226ENST00000496026 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
HDAC9-226ENST00000496026 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 C16orf90A8MZG2 172 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 PRSS1P07477 247 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 COX6A2Q02221 97 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 IFI27L1Q96BM0 104 aa9.67□□□□□ -0.86
HDAC9-226ENST00000496026 GEMIN7Q9H840 131 aaKnown RBP9.67□□□□□ -0.86
HDAC9-226ENST00000496026 DNAH17Q9UFH2 4485 aa9.66□□□□□ -0.86
HDAC9-226ENST00000496026 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
HDAC9-226ENST00000496026 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
HDAC9-226ENST00000496026 APOMO95445 188 aa9.66□□□□□ -0.86
HDAC9-226ENST00000496026 HERVK_113P63121 156 aa9.66□□□□□ -0.86
HDAC9-226ENST00000496026 FRAS1Q86XX4 4008 aa9.65□□□□□ -0.86
HDAC9-226ENST00000496026 FABP4P15090 132 aa9.65□□□□□ -0.86
HDAC9-226ENST00000496026 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
HDAC9-226ENST00000496026 HSPB8Q9UJY1 196 aa9.65□□□□□ -0.86
HDAC9-226ENST00000496026 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-226ENST00000496026 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
HDAC9-226ENST00000496026 A0A087WZ39 114 aa9.63□□□□□ -0.87
HDAC9-226ENST00000496026 ZNF561-AS1K7EIQ3 104 aa9.63□□□□□ -0.87
HDAC9-226ENST00000496026 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
HDAC9-226ENST00000496026 FAT2Q9NYQ8 4349 aa9.63□□□□□ -0.87
HDAC9-226ENST00000496026 GCSHP23434 173 aa9.62□□□□□ -0.87
HDAC9-226ENST00000496026 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
HDAC9-226ENST00000496026 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
HDAC9-226ENST00000496026 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-226ENST00000496026 H0Y8G0 127 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 OR10D4PQ8NGN7 298 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 ORAOV1Q8WV07 137 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 PACRGQ96M98 296 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-226ENST00000496026 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
HDAC9-226ENST00000496026 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
HDAC9-226ENST00000496026 TRAV12-1A0A0B4J245 112 aa9.6□□□□□ -0.87
HDAC9-226ENST00000496026 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
HDAC9-226ENST00000496026 CNBPP62633 177 aaKnown RBP9.6□□□□□ -0.87
HDAC9-226ENST00000496026 IGLV4-69A0A075B6H9 119 aa9.59□□□□□ -0.87
HDAC9-226ENST00000496026 MAP1LC3CQ9BXW4 147 aa9.59□□□□□ -0.87
HDAC9-226ENST00000496026 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
HDAC9-226ENST00000496026 H3BRM9 83 aa9.58□□□□□ -0.88
HDAC9-226ENST00000496026 SLPIP03973 132 aa9.58□□□□□ -0.88
HDAC9-226ENST00000496026 S100A6P06703 90 aa9.58□□□□□ -0.88
HDAC9-226ENST00000496026 LINC01620Q4KN68 170 aa9.58□□□□□ -0.88
HDAC9-226ENST00000496026 CAMK2N2Q96S95 79 aa9.58□□□□□ -0.88
HDAC9-226ENST00000496026 PRSS2P07478 247 aa9.57□□□□□ -0.88
HDAC9-226ENST00000496026 SYCNQ0VAF6 134 aa9.57□□□□□ -0.88
HDAC9-226ENST00000496026 TMEM170BQ5T4T1 132 aa9.57□□□□□ -0.88
HDAC9-226ENST00000496026 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
HDAC9-226ENST00000496026 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
HDAC9-226ENST00000496026 C11orf86A6NJI1 115 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 F8VRH5 84 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-226ENST00000496026 KRTAP10-1P60331 282 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 CARD19Q96LW7 228 aa9.56□□□□□ -0.88
HDAC9-226ENST00000496026 SMIM1B2RUZ4 78 aa9.55□□□□□ -0.88
HDAC9-226ENST00000496026 ODF1Q14990 250 aa9.55□□□□□ -0.88
HDAC9-226ENST00000496026 PKD1P98161 4303 aa9.55□□□□□ -0.88
HDAC9-226ENST00000496026 F8WDY8 70 aa9.54□□□□□ -0.88
HDAC9-226ENST00000496026 NDUFA1O15239 70 aa9.54□□□□□ -0.88
HDAC9-226ENST00000496026 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
HDAC9-226ENST00000496026 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
HDAC9-226ENST00000496026 S100A2P29034 98 aa9.53□□□□□ -0.88
HDAC9-226ENST00000496026 CKS1BP61024 79 aa9.53□□□□□ -0.88
HDAC9-226ENST00000496026 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
HDAC9-226ENST00000496026 Q6ZRU5 148 aa9.53□□□□□ -0.88
HDAC9-226ENST00000496026 Q8IZM0 81 aa9.53□□□□□ -0.88
HDAC9-226ENST00000496026 PLNP26678 52 aa9.52□□□□□ -0.89
HDAC9-226ENST00000496026 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.89
HDAC9-226ENST00000496026 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
HDAC9-226ENST00000496026 DPM2O94777 84 aa9.51□□□□□ -0.89
HDAC9-226ENST00000496026 KRTDAPP60985 99 aa9.51□□□□□ -0.89
HDAC9-226ENST00000496026 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
HDAC9-226ENST00000496026 HIST3H2BBQ8N257 126 aa9.51□□□□□ -0.89
HDAC9-226ENST00000496026 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
HDAC9-226ENST00000496026 IGKCP01834 107 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 C3orf79P0CE67 100 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 SNRPEP62304 92 aaKnown RBP9.5□□□□□ -0.89
HDAC9-226ENST00000496026 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 DNAH11Q96DT5 4516 aa9.5□□□□□ -0.89
HDAC9-226ENST00000496026 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
HDAC9-226ENST00000496026 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
HDAC9-226ENST00000496026 C10orf25Q5T742 122 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms