RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 DEFB116Q30KQ4 102 aa3.81□□□□□ -1.8
NF1-216ENST00000495910 CSNK1G2-AS1Q8NCQ2 148 aa3.81□□□□□ -1.8
NF1-216ENST00000495910 MBD6Q96DN6 1003 aa3.81□□□□□ -1.8
NF1-216ENST00000495910 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 LTBP2Q14767 1821 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 VWCEQ96DN2 955 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 RITA1Q96K30 269 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 C19orf84I3L1E1 186 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 Q6ZS46 218 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.8□□□□□ -1.82e-8■■■■■ 34.3
NF1-216ENST00000495910 DEFB113Q30KQ7 82 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 NCOA6Q14686 2063 aaPredicted RBP3.8□□□□□ -1.8
NF1-216ENST00000495910 UQCR11O14957 56 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 EGFEM1PQ0D2K5 195 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 TSHBP01222 138 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 PLA2G2EQ9NZK7 142 aa3.8□□□□□ -1.8
NF1-216ENST00000495910 DSCAMO60469 2012 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 RIF1Q5UIP0 2472 aaKnown RBP3.79□□□□□ -1.8
NF1-216ENST00000495910 APLNQ9ULZ1 77 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 PCDH15Q96QU1 1955 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 IGLV2-8P01709 118 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 LINC01600Q96MT4 127 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 DOPEY2Q9Y3R5 2298 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 UNQ9165/PRO28630Q6UXU0 137 aa3.79□□□□□ -1.8
NF1-216ENST00000495910 SPTAN1Q13813 2472 aaKnown RBP3.79□□□□□ -1.8
NF1-216ENST00000495910 IGLV2-18A0A075B6J9 118 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 LINC00482Q8N8I6 264 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 TMEM105Q8N8V8 129 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 M0R2N4 97 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 RSPO1Q2MKA7 263 aaPredicted RBP3.78□□□□□ -1.8
NF1-216ENST00000495910 C9orf116Q5BN46 136 aaPredicted RBP3.78□□□□□ -1.8
NF1-216ENST00000495910 BBC3Q96PG8 261 aaPredicted RBP3.78□□□□□ -1.8
NF1-216ENST00000495910 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 FAM215AQ9Y5M1 114 aa3.78□□□□□ -1.8
NF1-216ENST00000495910 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 IGLV2-14P01704 120 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 IGLV3-1P01715 115 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 FHL2Q14192 279 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 TRAV22A0A0B4J277 110 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 K7EQG2 157 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 PCNX3Q9H6A9 2034 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 ZNF503-AS2A6NEH8 195 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 LINC01556Q5JQF7 62 aa3.77□□□□□ -1.81
NF1-216ENST00000495910 KPRPQ5T749 579 aaPredicted RBP3.77□□□□□ -1.81
NF1-216ENST00000495910 DAZAP2Q15038 168 aaPredicted RBP3.76□□□□□ -1.81
NF1-216ENST00000495910 PROK1P58294 105 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 COL4A1P02462 1669 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 IGFL3Q6UXB1 125 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 LY6G6CO95867 125 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 FSTL3O95633 263 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 C6orf223Q8N319 242 aa3.76□□□□□ -1.81
NF1-216ENST00000495910 MED13Q9UHV7 2174 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 EXPH5Q8NEV8 1989 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 DEFB114Q30KQ6 69 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 EP300Q09472 2414 aaPredicted RBP3.75□□□□□ -1.81
NF1-216ENST00000495910 ABCA4P78363 2273 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 MED13LQ71F56 2210 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 CDC42SE2Q9NRR3 84 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 MED12Q93074 2177 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 COL5A1P20908 1838 aaPredicted RBP3.75□□□□□ -1.81
NF1-216ENST00000495910 A8MUN3 132 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 ELOF1P60002 83 aaKnown RBP3.75□□□□□ -1.81
NF1-216ENST00000495910 UNQ6190/PRO20217Q6UXQ8 127 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 ZFP36P26651 326 aaKnown RBP3.75□□□□□ -1.81
NF1-216ENST00000495910 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 E7EUB6 86 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 MRGPRG-AS1Q2M3A8 158 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 PLCE1Q9P212 2302 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 H3BS24 57 aa3.75□□□□□ -1.81
NF1-216ENST00000495910 THSD7BQ9C0I4 1608 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 PLXNB1O43157 2135 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 LOC101927531A0A1B0GV80 90 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 NOTCH3Q9UM47 2321 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 CPAMD8Q8IZJ3 1885 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 GVINP1Q7Z2Y8 2422 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 ODF3BA8MYP8 253 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 LINC01561Q8N1V8 128 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 A0A1B0GW54 56 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 COL4A6Q14031 1691 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
NF1-216ENST00000495910 Q8N2B8 174 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 USF3Q68DE3 2245 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 CHCHD7Q9BUK0 85 aa3.74□□□□□ -1.81
NF1-216ENST00000495910 CDIP1Q9H305 208 aa3.73□□□□□ -1.81
NF1-216ENST00000495910 POLR2KP53803 58 aaKnown RBP3.73□□□□□ -1.81
NF1-216ENST00000495910 COA5Q86WW8 74 aa3.73□□□□□ -1.81
NF1-216ENST00000495910 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
NF1-216ENST00000495910 TET2Q6N021 2002 aaPredicted RBP3.73□□□□□ -1.81
NF1-216ENST00000495910 SMIM1B2RUZ4 78 aa3.73□□□□□ -1.81
NF1-216ENST00000495910 PRR3P79522 188 aaKnown RBP3.73□□□□□ -1.81
NF1-216ENST00000495910 LINC00242Q5T6M2 205 aa3.73□□□□□ -1.81
NF1-216ENST00000495910 Q6ZSV7 163 aa3.73□□□□□ -1.81
NF1-216ENST00000495910 Q8N7P7 452 aa3.72□□□□□ -1.81
NF1-216ENST00000495910 WNK1Q9H4A3 2382 aa3.72□□□□□ -1.81
NF1-216ENST00000495910 IGLV1-47P01700 117 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms