RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 ST20Q9HBF5 79 aa6.41□□□□□ -1.38
HLA-DOA-206ENST00000495532 RAB19A4D1S5 217 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 BCE1O60756 84 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 ZNF345Q14585 488 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 KIAA0087Q14695 138 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 LINC00337Q8N6G1 96 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 CYTL1Q9NRR1 136 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
HLA-DOA-206ENST00000495532 TRBV20OR9-2A0A075B6H5 130 aa6.39□□□□□ -1.39
HLA-DOA-206ENST00000495532 TRBV30A0A0K0K1B3 111 aa6.39□□□□□ -1.39
HLA-DOA-206ENST00000495532 GNG4P50150 75 aa6.39□□□□□ -1.39
HLA-DOA-206ENST00000495532 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
HLA-DOA-206ENST00000495532 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
HLA-DOA-206ENST00000495532 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
HLA-DOA-206ENST00000495532 FXYD6-FXYD2A0A087WZ82 144 aa6.38□□□□□ -1.39
HLA-DOA-206ENST00000495532 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
HLA-DOA-206ENST00000495532 CCL20P78556 96 aa6.38□□□□□ -1.39
HLA-DOA-206ENST00000495532 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
HLA-DOA-206ENST00000495532 FAM213BQ8TBF2 198 aa6.38□□□□□ -1.39
HLA-DOA-206ENST00000495532 C2orf82Q6UX34 121 aa6.37□□□□□ -1.39
HLA-DOA-206ENST00000495532 KRTAP13-1Q8IUC0 172 aa6.37□□□□□ -1.39
HLA-DOA-206ENST00000495532 FAM104AQ969W3 186 aa6.37□□□□□ -1.39
HLA-DOA-206ENST00000495532 IGKV2D-26A0A0A0MRZ7 120 aa6.36□□□□□ -1.39
HLA-DOA-206ENST00000495532 SMLR1H3BR10 107 aa6.36□□□□□ -1.39
HLA-DOA-206ENST00000495532 IFITM2Q01629 132 aa6.36□□□□□ -1.39
HLA-DOA-206ENST00000495532 SMAGPQ0VAQ4 97 aa6.36□□□□□ -1.39
HLA-DOA-206ENST00000495532 LBHQ53QV2 105 aaPredicted RBP6.36□□□□□ -1.39
HLA-DOA-206ENST00000495532 TIMM21Q9BVV7 248 aa6.36□□□□□ -1.39
HLA-DOA-206ENST00000495532 FCER1GP30273 86 aa6.35□□□□□ -1.39
HLA-DOA-206ENST00000495532 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
HLA-DOA-206ENST00000495532 BIN3Q9NQY0 253 aa6.35□□□□□ -1.39
HLA-DOA-206ENST00000495532 MRPL55Q7Z7F7 128 aaKnown RBP6.34□□□□□ -1.39
HLA-DOA-206ENST00000495532 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.39
HLA-DOA-206ENST00000495532 XAGE1AQ9HD64 81 aa6.34□□□□□ -1.39
HLA-DOA-206ENST00000495532 MANBALQ9NQG1 85 aa6.34□□□□□ -1.39
HLA-DOA-206ENST00000495532 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
HLA-DOA-206ENST00000495532 UMAD1C9J7I0 102 aa6.33□□□□□ -1.4
HLA-DOA-206ENST00000495532 VCYO14598 125 aa6.33□□□□□ -1.4
HLA-DOA-206ENST00000495532 H2AFB1P0C5Y9 115 aa6.33□□□□□ -1.4
HLA-DOA-206ENST00000495532 SLC51BQ86UW2 128 aa6.33□□□□□ -1.4
HLA-DOA-206ENST00000495532 GNG13Q9P2W3 67 aa6.33□□□□□ -1.4
HLA-DOA-206ENST00000495532 ZNF727A8MUV8 499 aa6.32□□□□□ -1.4
HLA-DOA-206ENST00000495532 K7EN84 100 aa6.32□□□□□ -1.4
HLA-DOA-206ENST00000495532 ARPC5O15511 151 aa6.32□□□□□ -1.4
HLA-DOA-206ENST00000495532 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
HLA-DOA-206ENST00000495532 RAB4AP20338 218 aa6.31□□□□□ -1.4
HLA-DOA-206ENST00000495532 RPL39P62891 51 aaKnown RBP6.31□□□□□ -1.4
HLA-DOA-206ENST00000495532 C3orf22Q8N5N4 141 aa6.31□□□□□ -1.4
HLA-DOA-206ENST00000495532 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
HLA-DOA-206ENST00000495532 TGIF2-C20orf24A0A0A6YYL0 155 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 SMKR1H3BMG3 65 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 UBE2AP49459 152 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 SUMO2P61956 95 aaKnown RBP6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 AMN1Q8IY45 258 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 NRACQ8N912 160 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 LINC00167Q96N53 147 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 KIR2DL4Q99706 377 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
HLA-DOA-206ENST00000495532 KANTRA0A1W2PQU2 76 aa6.29□□□□□ -1.4
HLA-DOA-206ENST00000495532 HBBP68871 147 aa6.29□□□□□ -1.4
HLA-DOA-206ENST00000495532 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
HLA-DOA-206ENST00000495532 NDUFA5Q16718 116 aa6.29□□□□□ -1.4
HLA-DOA-206ENST00000495532 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
HLA-DOA-206ENST00000495532 PDE6DO43924 150 aa6.28□□□□□ -1.4
HLA-DOA-206ENST00000495532 TNFRSF6BO95407 300 aa6.28□□□□□ -1.4
HLA-DOA-206ENST00000495532 XP32Q5T750 250 aa6.28□□□□□ -1.4
HLA-DOA-206ENST00000495532 OCC1Q8TAD7 63 aa6.28□□□□□ -1.4
HLA-DOA-206ENST00000495532 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
HLA-DOA-206ENST00000495532 CLLU1Q5K131 121 aa6.27□□□□□ -1.41
HLA-DOA-206ENST00000495532 GAGE10A6NGK3 116 aa6.26□□□□□ -1.41
HLA-DOA-206ENST00000495532 PRLHP81277 87 aa6.26□□□□□ -1.41
HLA-DOA-206ENST00000495532 PNRC1Q12796 327 aaPredicted RBP6.26□□□□□ -1.41
HLA-DOA-206ENST00000495532 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
HLA-DOA-206ENST00000495532 A0A1B0GUT8 65 aa6.25□□□□□ -1.41
HLA-DOA-206ENST00000495532 LINC00862A6NCI5 91 aa6.25□□□□□ -1.41
HLA-DOA-206ENST00000495532 A8MWL6 223 aa6.25□□□□□ -1.41
HLA-DOA-206ENST00000495532 GATCO43716 136 aaKnown RBP6.25□□□□□ -1.41
HLA-DOA-206ENST00000495532 PPP1R17O96001 155 aa6.25□□□□□ -1.41
HLA-DOA-206ENST00000495532 RPL32P62910 135 aaKnown RBP6.25□□□□□ -1.41
HLA-DOA-206ENST00000495532 PPP1R2P9O14990 202 aa6.24□□□□□ -1.41
HLA-DOA-206ENST00000495532 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
HLA-DOA-206ENST00000495532 BORCS7Q96B45 105 aa6.24□□□□□ -1.41
HLA-DOA-206ENST00000495532 HIGD1CA8MV81 97 aa6.23□□□□□ -1.41
HLA-DOA-206ENST00000495532 CKS1BP61024 79 aa6.23□□□□□ -1.41
HLA-DOA-206ENST00000495532 CT83Q5H943 113 aa6.23□□□□□ -1.41
HLA-DOA-206ENST00000495532 FAM231DQ6ZW35 169 aa6.23□□□□□ -1.41
HLA-DOA-206ENST00000495532 DAND5Q8N907 189 aa6.23□□□□□ -1.41
HLA-DOA-206ENST00000495532 PLEKHB2Q96CS7 222 aa6.23□□□□□ -1.41
HLA-DOA-206ENST00000495532 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
HLA-DOA-206ENST00000495532 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
HLA-DOA-206ENST00000495532 PRSS2P07478 247 aa6.22□□□□□ -1.41
HLA-DOA-206ENST00000495532 ALKAL2Q6UX46 152 aa6.22□□□□□ -1.41
HLA-DOA-206ENST00000495532 Q8IZM0 81 aa6.22□□□□□ -1.41
HLA-DOA-206ENST00000495532 TOMM7Q9P0U1 55 aa6.22□□□□□ -1.41
HLA-DOA-206ENST00000495532 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 M0R2T5 61 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms