RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	TMUB2	Q71RG4	321 aa		4.29	□□□□□ -1.72
BBS9-213	ENST00000495426	KRTAP11-1	Q8IUC1	163 aa		4.29	□□□□□ -1.72
BBS9-213	ENST00000495426	KCNRG	Q8N5I3	272 aa		4.29	□□□□□ -1.72
BBS9-213	ENST00000495426	C11orf52	Q96A22	123 aa		4.29	□□□□□ -1.72
BBS9-213	ENST00000495426	COX7A2L	O14548	114 aa		4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	BCL2L11	O43521	198 aa		4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	LBH	Q53QV2	105 aa	Predicted RBP	4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	TSKU	Q8WUA8	353 aa		4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	MRAP2	Q96G30	205 aa		4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	CYTL1	Q9NRR1	136 aa		4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	TMEM242	Q9NWH2	141 aa		4.28	□□□□□ -1.72
BBS9-213	ENST00000495426	FAM168B	A1KXE4	195 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	ARPC5	O15511	151 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	ESD	P10768	282 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	PMCH	P20382	165 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	SPAG11B	Q08648	103 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	MBD3L1	Q8WWY6	194 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	C2orf48	Q96LS8	159 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	OPRPN	Q99935	248 aa	Predicted RBP	4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	CNFN	Q9BYD5	112 aa		4.27	□□□□□ -1.73
BBS9-213	ENST00000495426	RAB19	A4D1S5	217 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	C5orf52	A6NGY3	159 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426		G3V3Q6	166 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426		I3L3M4	83 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	TSPAN13	O95857	204 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	GNG4	P50150	75 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	MRPL52	Q86TS9	123 aa	Known RBP	4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	SMIM12	Q96EX1	92 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	MANBAL	Q9NQG1	85 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	CDC42SE2	Q9NRR3	84 aa		4.26	□□□□□ -1.73
BBS9-213	ENST00000495426	TRBV20OR9-2	A0A075B6H5	130 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	C7orf77	A4D0Y5	90 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	C1orf196	B1AJZ1	125 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	UMAD1	C9J7I0	102 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426		M0QXV9	152 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	FOXA3	P55318	350 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	UBE2B	P63146	152 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	CCL20	P78556	96 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	RNASE13	Q5GAN3	156 aa	Known RBP	4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	TEX261	Q6UWH6	196 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	SMIM15	Q7Z3B0	74 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	C5orf38	Q86SI9	138 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	C9orf62	Q8N4C0	152 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	GNG13	Q9P2W3	67 aa		4.25	□□□□□ -1.73
BBS9-213	ENST00000495426	TRAV13-1	A0A0B4J241	112 aa		4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	TRBV6-5	A0A0K0K1A5	114 aa		4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	PRAC1	Q96KF2	57 aa		4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	RNASE7	Q9H1E1	156 aa	Known RBP	4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	RPP21	Q9H633	154 aa	Known RBP	4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	ST20	Q9HBF5	79 aa		4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	BIN3	Q9NQY0	253 aa		4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	MRPL35	Q9NZE8	188 aa	Known RBP	4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.24	□□□□□ -1.73
BBS9-213	ENST00000495426	NDUFA1	O15239	70 aa		4.23	□□□□□ -1.73
BBS9-213	ENST00000495426		Q6ZUT4	128 aa		4.23	□□□□□ -1.73
BBS9-213	ENST00000495426	OR10D4P	Q8NGN7	298 aa		4.23	□□□□□ -1.73
BBS9-213	ENST00000495426	ORAOV1	Q8WV07	137 aa		4.23	□□□□□ -1.73
BBS9-213	ENST00000495426	IMMP2L	Q96T52	175 aa		4.23	□□□□□ -1.73
BBS9-213	ENST00000495426	FSIP2	Q5CZC0	6907 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	TRBV27	A0A0K0K1C4	114 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	TLX1NB	P0CAT3	122 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	CFC1B	P0CG36	223 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	CFC1	P0CG37	223 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	ZNF345	Q14585	488 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	KRTAP7-1	Q8IUC3	87 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	KRTAP9-8	Q9BYQ0	159 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	SMDT1	Q9H4I9	107 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	MED9	Q9NWA0	146 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	C6orf48	Q9UBA6	75 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426	UBE2D4	Q9Y2X8	147 aa		4.22	□□□□□ -1.73
BBS9-213	ENST00000495426		A0A087X002	238 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426		A4D1N5	150 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426		F8WDY8	70 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	SMLR1	H3BR10	107 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426		K7EN84	100 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	PDE6D	O43924	150 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	FCER1G	P30273	86 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	POLR2K	P53803	58 aa	Known RBP	4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	SMAGP	Q0VAQ4	97 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	FAM210A	Q96ND0	272 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	LITAF	Q99732	161 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	RETNLB	Q9BQ08	111 aa		4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	CSDC2	Q9Y534	153 aa	Known RBP	4.21	□□□□□ -1.74
BBS9-213	ENST00000495426	KANTR	A0A1W2PQU2	76 aa		4.2	□□□□□ -1.74
BBS9-213	ENST00000495426	ZNF861P	O60384	105 aa		4.2	□□□□□ -1.74
BBS9-213	ENST00000495426	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.2	□□□□□ -1.74
BBS9-213	ENST00000495426	TYMSOS	Q8TAI1	123 aa		4.2	□□□□□ -1.74
BBS9-213	ENST00000495426	TEX46	H3BTG2	121 aa		4.19	□□□□□ -1.74
BBS9-213	ENST00000495426	TPRXL	Q17RH7	258 aa		4.19	□□□□□ -1.74
BBS9-213	ENST00000495426	C9orf129	Q5T035	196 aa	Known RBP	4.19	□□□□□ -1.74
BBS9-213	ENST00000495426	CRCT1	Q9UGL9	99 aa		4.19	□□□□□ -1.74
BBS9-213	ENST00000495426	PYGO1	Q9Y3Y4	419 aa		4.19	□□□□□ -1.74
BBS9-213	ENST00000495426	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426		A8MWL6	223 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	SMKR1	H3BMG3	65 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	GATC	O43716	136 aa	Known RBP	4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	NUPR1	O60356	82 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	CRYGA	P11844	174 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	TMEM241	Q24JQ0	296 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms