RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
ERCC3-209ENST00000494464 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
ERCC3-209ENST00000494464 DLEU1O43261 78 aa8.81□□□□□ -1
ERCC3-209ENST00000494464 PAPPA-AS1Q5QFB9 102 aa8.81□□□□□ -1
ERCC3-209ENST00000494464 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
ERCC3-209ENST00000494464 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
ERCC3-209ENST00000494464 M0R143 59 aa8.8□□□□□ -1
ERCC3-209ENST00000494464 STPG4Q8N801 248 aa8.8□□□□□ -1
ERCC3-209ENST00000494464 MAPKAPK5-AS1Q8N8E1 139 aa8.8□□□□□ -1
ERCC3-209ENST00000494464 TM2D2Q9BX73 214 aa8.8□□□□□ -1
ERCC3-209ENST00000494464 CST9LQ9H4G1 147 aa8.8□□□□□ -1
ERCC3-209ENST00000494464 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
ERCC3-209ENST00000494464 FGF6P10767 208 aa8.79□□□□□ -1
ERCC3-209ENST00000494464 ZC2HC1BQ5TFG8 222 aa8.79□□□□□ -1
ERCC3-209ENST00000494464 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
ERCC3-209ENST00000494464 NTN5Q8WTR8 489 aaPredicted RBP8.79□□□□□ -1
ERCC3-209ENST00000494464 IGLV4-69A0A075B6H9 119 aa8.78□□□□□ -1
ERCC3-209ENST00000494464 FUSP35637 526 aaKnown RBP eCLIP8.78□□□□□ -1
ERCC3-209ENST00000494464 CTAG1AP78358 180 aa8.78□□□□□ -1
ERCC3-209ENST00000494464 BOD1L2Q8IYS8 172 aa8.78□□□□□ -1
ERCC3-209ENST00000494464 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
ERCC3-209ENST00000494464 SNHG12Q9BXW3 62 aa8.78□□□□□ -1
ERCC3-209ENST00000494464 ABCA13Q86UQ4 5058 aa8.78□□□□□ -1
ERCC3-209ENST00000494464 TRBV6-8A0A0A6YYG3 113 aa8.77□□□□□ -1.01
ERCC3-209ENST00000494464 Q8N1X5 172 aa8.77□□□□□ -1.01
ERCC3-209ENST00000494464 Q8N814 137 aa8.77□□□□□ -1.01
ERCC3-209ENST00000494464 C2orf88Q9BSF0 95 aa8.77□□□□□ -1.01
ERCC3-209ENST00000494464 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
ERCC3-209ENST00000494464 UBE2D4Q9Y2X8 147 aa8.77□□□□□ -1.01
ERCC3-209ENST00000494464 MRPS36P82909 103 aaKnown RBP8.76□□□□□ -1.01
ERCC3-209ENST00000494464 SMAGPQ0VAQ4 97 aa8.76□□□□□ -1.01
ERCC3-209ENST00000494464 AMELXQ99217 191 aa8.76□□□□□ -1.01
ERCC3-209ENST00000494464 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
ERCC3-209ENST00000494464 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
ERCC3-209ENST00000494464 NMUP48645 174 aa8.75□□□□□ -1.01
ERCC3-209ENST00000494464 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
ERCC3-209ENST00000494464 TMEM97Q5BJF2 176 aa8.75□□□□□ -1.01
ERCC3-209ENST00000494464 C2orf91Q6ZV80 131 aa8.75□□□□□ -1.01
ERCC3-209ENST00000494464 RMI2Q96E14 147 aa8.75□□□□□ -1.01
ERCC3-209ENST00000494464 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 IGLV5-52A0A0A0MRZ9 124 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 E9PLD3 99 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 GCSHP23434 173 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 VCX2Q9H322 139 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
ERCC3-209ENST00000494464 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
ERCC3-209ENST00000494464 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-209ENST00000494464 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-209ENST00000494464 H7C423 109 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 HERVK_113P61574 105 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 OPRPNQ99935 248 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-209ENST00000494464 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 XGP55808 180 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 WFDC2Q14508 124 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 CHAC1Q9BUX1 264 aa8.73□□□□□ -1.01
ERCC3-209ENST00000494464 MPV17L2Q567V2 206 aa8.72□□□□□ -1.01
ERCC3-209ENST00000494464 Q6ZUT4 128 aa8.72□□□□□ -1.01
ERCC3-209ENST00000494464 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
ERCC3-209ENST00000494464 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
ERCC3-209ENST00000494464 HIGD1BQ9P298 99 aa8.72□□□□□ -1.01
ERCC3-209ENST00000494464 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
ERCC3-209ENST00000494464 TRBV25-1A0A075B6N4 114 aa8.71□□□□□ -1.02
ERCC3-209ENST00000494464 IGKV2D-24A0A075B6R9 120 aa8.71□□□□□ -1.02
ERCC3-209ENST00000494464 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
ERCC3-209ENST00000494464 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
ERCC3-209ENST00000494464 CRPP02741 224 aa8.7□□□□□ -1.02
ERCC3-209ENST00000494464 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-209ENST00000494464 ZNF25P17030 456 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-209ENST00000494464 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
ERCC3-209ENST00000494464 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 TMEM223A0PJW6 202 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 LECT2O14960 151 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 HSD52Q0P140 79 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 FAT1Q14517 4588 aa8.69□□□□□ -1.02
ERCC3-209ENST00000494464 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 UBE2L6O14933 153 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 ANGP03950 147 aaKnown RBP8.68□□□□□ -1.02
ERCC3-209ENST00000494464 HINT1P49773 126 aaPredicted RBP8.68□□□□□ -1.02
ERCC3-209ENST00000494464 UBE2D1P51668 147 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 BATFQ16520 125 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 ENHOQ6UWT2 76 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 C1orf43Q9BWL3 253 aa8.68□□□□□ -1.02
ERCC3-209ENST00000494464 EPM2AB3EWF7 344 aa8.67□□□□□ -1.02
ERCC3-209ENST00000494464 MIAQ16674 131 aa8.67□□□□□ -1.02
ERCC3-209ENST00000494464 OR5A1Q8NGJ0 315 aa8.67□□□□□ -1.02
ERCC3-209ENST00000494464 TTTY13Q9BZ97 58 aa8.67□□□□□ -1.02
ERCC3-209ENST00000494464 PRR34Q9NV39 138 aa8.67□□□□□ -1.02
ERCC3-209ENST00000494464 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 LEPROTO15243 131 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 RBX1P62877 108 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 SEC11AP67812 179 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 GAGE6Q13070 117 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms