RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 HIST2H2BDQ6DRA6 164 aa11.97□□□□□ -0.49
SYP-208ENST00000494396 CDKN2A-AS1Q9UH64 79 aa11.97□□□□□ -0.49
SYP-208ENST00000494396 HIVEP1P15822 2718 aa11.97□□□□□ -0.49
SYP-208ENST00000494396 DAZ2Q13117 558 aaKnown RBP11.96□□□□□ -0.49
SYP-208ENST00000494396 BEAN1Q3B7T3 259 aa11.96□□□□□ -0.49
SYP-208ENST00000494396 CEMP1Q6PRD7 247 aaPredicted RBP11.96□□□□□ -0.49
SYP-208ENST00000494396 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.49
SYP-208ENST00000494396 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.49
SYP-208ENST00000494396 CUBNO60494 3623 aa11.96□□□□□ -0.49
SYP-208ENST00000494396 A0A1W2PRX2 142 aa11.96□□□□□ -0.5
SYP-208ENST00000494396 A8MTW9 85 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 ATOX1O00244 68 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 BAALC-AS2P0C853 105 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 COX7CP15954 63 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 SORL1Q92673 2214 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 IGKV3-20P01619 116 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 IGHV3-53P01767 116 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 RPS28P62857 69 aaKnown RBP11.95□□□□□ -0.5
SYP-208ENST00000494396 SMCR5Q8TEV8 140 aa11.95□□□□□ -0.5
SYP-208ENST00000494396 CCL24O00175 119 aa11.94□□□□□ -0.5
SYP-208ENST00000494396 CRYGAP11844 174 aa11.94□□□□□ -0.5
SYP-208ENST00000494396 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
SYP-208ENST00000494396 Q9H8V8 135 aa11.94□□□□□ -0.5
SYP-208ENST00000494396 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
SYP-208ENST00000494396 A8MZ25 164 aa11.93□□□□□ -0.5
SYP-208ENST00000494396 J3KT08 172 aa11.93□□□□□ -0.5
SYP-208ENST00000494396 HIST1H4AP62805 103 aaKnown RBP11.93□□□□□ -0.5
SYP-208ENST00000494396 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
SYP-208ENST00000494396 RNASE13Q5GAN3 156 aaKnown RBP11.93□□□□□ -0.5
SYP-208ENST00000494396 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
SYP-208ENST00000494396 PROK1P58294 105 aa11.92□□□□□ -0.5
SYP-208ENST00000494396 DYNLRB2Q8TF09 96 aa11.92□□□□□ -0.5
SYP-208ENST00000494396 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
SYP-208ENST00000494396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.91□□□□□ -0.5
SYP-208ENST00000494396 IGKV2-29A2NJV5 120 aaPredicted RBP11.91□□□□□ -0.5
SYP-208ENST00000494396 RPL28P46779 137 aaKnown RBP11.9□□□□□ -0.5
SYP-208ENST00000494396 LINC00694P0DN24 101 aa11.9□□□□□ -0.51
SYP-208ENST00000494396 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.51
SYP-208ENST00000494396 IGHV3-73A0A0B4J1V6 119 aa11.89□□□□□ -0.51
SYP-208ENST00000494396 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
SYP-208ENST00000494396 FN1P02751 2386 aaKnown RBP11.89□□□□□ -0.51
SYP-208ENST00000494396 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
SYP-208ENST00000494396 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
SYP-208ENST00000494396 MALP21145 153 aa11.88□□□□□ -0.51
SYP-208ENST00000494396 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 DEFB131AP59861 70 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 NACAE9PAV3 2078 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 KNCNA6PVL3 124 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
SYP-208ENST00000494396 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
SYP-208ENST00000494396 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
SYP-208ENST00000494396 RS1O15537 224 aa11.86□□□□□ -0.51
SYP-208ENST00000494396 SOSTDC1Q6X4U4 206 aa11.86□□□□□ -0.51
SYP-208ENST00000494396 C2orf48Q96LS8 159 aa11.86□□□□□ -0.51
SYP-208ENST00000494396 C22orf24Q9Y442 160 aa11.86□□□□□ -0.51
SYP-208ENST00000494396 C5orf47Q569G3 176 aa11.85□□□□□ -0.51
SYP-208ENST00000494396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.85□□□□□ -0.51
SYP-208ENST00000494396 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
SYP-208ENST00000494396 H0YGX0 51 aa11.85□□□□□ -0.51
SYP-208ENST00000494396 Q6ZSN1 163 aa11.85□□□□□ -0.51
SYP-208ENST00000494396 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
SYP-208ENST00000494396 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
SYP-208ENST00000494396 DNAL4O96015 105 aa11.84□□□□□ -0.51
SYP-208ENST00000494396 COX6A2Q02221 97 aa11.84□□□□□ -0.51
SYP-208ENST00000494396 Q6JHZ5 121 aa11.84□□□□□ -0.51
SYP-208ENST00000494396 CRPP02741 224 aa11.83□□□□□ -0.51
SYP-208ENST00000494396 RPL18AQ02543 176 aaKnown RBP11.83□□□□□ -0.51
SYP-208ENST00000494396 C3orf56Q8N813 242 aa11.83□□□□□ -0.52
SYP-208ENST00000494396 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.52
SYP-208ENST00000494396 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
SYP-208ENST00000494396 TMEM258P61165 79 aa11.82□□□□□ -0.52
SYP-208ENST00000494396 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
SYP-208ENST00000494396 OBSCN-AS1Q96MR7 158 aa11.82□□□□□ -0.52
SYP-208ENST00000494396 RBMY1BA6NDE4 496 aaKnown RBP11.81□□□□□ -0.52
SYP-208ENST00000494396 RBMY1EA6NEQ0 496 aaKnown RBP11.81□□□□□ -0.52
SYP-208ENST00000494396 F5H768 121 aa11.81□□□□□ -0.52
SYP-208ENST00000494396 RBMY1DP0C7P1 496 aaKnown RBP11.81□□□□□ -0.52
SYP-208ENST00000494396 HTN1P15515 57 aa11.81□□□□□ -0.52
SYP-208ENST00000494396 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
SYP-208ENST00000494396 OR13C6PQ8NH95 151 aa11.81□□□□□ -0.52
SYP-208ENST00000494396 FAM218AQ96MZ4 157 aa11.81□□□□□ -0.52
SYP-208ENST00000494396 F8P00451 2351 aa11.8□□□□□ -0.52
SYP-208ENST00000494396 Q9UF83 564 aa11.8□□□□□ -0.52
SYP-208ENST00000494396 SERP2Q8N6R1 65 aa11.79□□□□□ -0.52
SYP-208ENST00000494396 IGHV3-38A0A0C4DH36 116 aa11.79□□□□□ -0.52
SYP-208ENST00000494396 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
SYP-208ENST00000494396 INSP01308 110 aa11.78□□□□□ -0.52
SYP-208ENST00000494396 RPL36AP83881 106 aaKnown RBP11.78□□□□□ -0.52
SYP-208ENST00000494396 RPL36ALQ969Q0 106 aaKnown RBP11.78□□□□□ -0.52
SYP-208ENST00000494396 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
SYP-208ENST00000494396 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.52
SYP-208ENST00000494396 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
SYP-208ENST00000494396 SMIM9A6NGZ8 99 aa11.76□□□□□ -0.53
SYP-208ENST00000494396 S100A7L2Q5SY68 101 aa11.76□□□□□ -0.53
SYP-208ENST00000494396 IGLV1-51P01701 117 aa11.75□□□□□ -0.53
SYP-208ENST00000494396 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
SYP-208ENST00000494396 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
SYP-208ENST00000494396 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms