RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 GZMBP10144 247 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 AKR1C3P42330 323 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 RPS10P46783 165 aaKnown RBP3.18□□□□□ -1.9
PTCD3-219ENST00000494323 SULT1A2P50226 295 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
PTCD3-219ENST00000494323 IFITM2Q01629 132 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 CLLU1Q5K131 121 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 AKR1C8PQ5T2L2 129 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 BAGE2Q86Y30 109 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 CHCHD10Q8WYQ3 142 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-219ENST00000494323 MAP1LC3BQ9GZQ8 125 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 MED9Q9NWA0 146 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 A0A096LNI7 61 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 TEX46H3BTG2 121 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 NDUFS6O75380 124 aaKnown RBP3.17□□□□□ -1.9
PTCD3-219ENST00000494323 SPINK6Q6UWN8 80 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 C15orf56Q8N910 161 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 SFT2D1Q8WV19 159 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 LINC00526Q96FQ7 95 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 PGLYRP4Q96LB8 373 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 FAM210AQ96ND0 272 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 TMEM243Q9BU79 118 aa3.17□□□□□ -1.9
PTCD3-219ENST00000494323 FAM168BA1KXE4 195 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 LINC00862A6NCI5 91 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 UMAD1C9J7I0 102 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 UBE2L6O14933 153 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 SERF1AO75920 110 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 CYTL1Q9NRR1 136 aa3.16□□□□□ -1.9
PTCD3-219ENST00000494323 RAB19A4D1S5 217 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 H7C1H1 209 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 S100A9P06702 114 aaKnown RBP3.15□□□□□ -1.91
PTCD3-219ENST00000494323 CXCL1P09341 107 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 NTF3P20783 257 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 RNASEKQ6P5S7 137 aaKnown RBP3.15□□□□□ -1.91
PTCD3-219ENST00000494323 RASL11AQ6T310 242 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 LYZL1Q6UWQ5 148 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 ALKAL2Q6UX46 152 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 FER1L6-AS1Q8NA97 138 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 FAM213BQ8TBF2 198 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 NIT2Q9NQR4 276 aa3.15□□□□□ -1.91
PTCD3-219ENST00000494323 CSDC2Q9Y534 153 aaKnown RBP3.15□□□□□ -1.91
PTCD3-219ENST00000494323 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-219ENST00000494323 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 IGKV2-29A2NJV5 120 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-219ENST00000494323 IGLC6P0CF74 106 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 RPL35P42766 123 aaKnown RBP3.14□□□□□ -1.91
PTCD3-219ENST00000494323 XCL1P47992 114 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 CCL20P78556 96 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 COTL1Q14019 142 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 AMMECR1LQ6DCA0 310 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 COMMD7Q86VX2 200 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 OR2D3Q8NGH3 330 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 MBD3L1Q8WWY6 194 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 TCEAL7Q9BRU2 100 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
PTCD3-219ENST00000494323 GVQW2A0A096LPI5 108 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-219ENST00000494323 IFNA1P01562 189 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 FGF6P10767 208 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 FOXA3P55318 350 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-219ENST00000494323 CACNG7P62955 275 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 C9orf129Q5T035 196 aaKnown RBP3.13□□□□□ -1.91
PTCD3-219ENST00000494323 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 CEND1Q8N111 149 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
PTCD3-219ENST00000494323 LPAP08519 4548 aa3.13□□□□□ -1.91
PTCD3-219ENST00000494323 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 C19orf71A6NCJ1 209 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 FAM231BA6NCW3 169 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 F2Z2F3 143 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 CCL25O15444 150 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 TRGC1P0CF51 173 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 RPS20P60866 119 aaKnown RBP3.12□□□□□ -1.91
PTCD3-219ENST00000494323 SYCNQ0VAF6 134 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 PEA15Q15121 130 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 CENPWQ5EE01 88 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 CARD19Q96LW7 228 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 LINC00474Q9P2X8 69 aa3.12□□□□□ -1.91
PTCD3-219ENST00000494323 TRAV1-1A0A0B4J248 108 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 IGHV1-58A0A0C4DH39 117 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 LINC00959A0A1B0GUT2 108 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 MT-ND6P03923 174 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 BCL2P10415 239 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 GNG4P50150 75 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
PTCD3-219ENST00000494323 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 OR5A1Q8NGJ0 315 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 MANBALQ9NQG1 85 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 PSORS1C2Q9UIG4 136 aa3.11□□□□□ -1.91
PTCD3-219ENST00000494323 IGLV4-69A0A075B6H9 119 aa3.1□□□□□ -1.91
PTCD3-219ENST00000494323 LOC107984640A0A0U1RRK4 108 aa3.1□□□□□ -1.91
PTCD3-219ENST00000494323 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
PTCD3-219ENST00000494323 SNAPINO95295 136 aa3.1□□□□□ -1.91
PTCD3-219ENST00000494323 APCSP02743 223 aa3.1□□□□□ -1.91
PTCD3-219ENST00000494323 PMCHP20382 165 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms