RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RBMY1CP0DJD4 496 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 RBMY1FQ15415 496 aaKnown RBP1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 C10orf55Q5SWW7 151 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 C2orf66Q6UXQ4 117 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 Q6ZRU5 148 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 C11orf45Q8TAV5 145 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 HIST1H4GQ99525 98 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV3OR16-9A0A0B4J2B5 98 aa1.71□□□□□ -2.13
CDC42EP3-205ENST00000494083 RPL7P18124 248 aaKnown RBP1.71□□□□□ -2.13
CDC42EP3-205ENST00000494083 VMO1Q7Z5L0 202 aa1.71□□□□□ -2.13
CDC42EP3-205ENST00000494083 ICOSQ9Y6W8 199 aa1.71□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV1-58A0A0C4DH39 117 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3-48P01763 117 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 CCL4P13236 92 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 ORM2P19652 201 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 APOC4P55056 127 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 TTC32Q5I0X7 151 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 SCGB1D4Q6XE38 83 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 GOLT1AQ6ZVE7 132 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 C20orf203Q8NBC4 194 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 SRSF12Q8WXF0 261 aaKnown RBP1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 LRBAP50851 2863 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 ZGRF1Q86YA3 2104 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 COX7A2LO14548 114 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 PPP1R17O96001 155 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 MINOS1Q5TGZ0 78 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 ATP5EP2Q5VTU8 51 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 SPINK14Q6IE38 97 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 SFTA2Q6UW10 78 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 LYPD2Q6UXB3 125 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 DEFB119Q8N690 84 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 CSNK1G2-AS1Q8NCQ2 148 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 TNCP24821 2201 aa1.71□□□□□ -2.14
CDC42EP3-205ENST00000494083 TEX49A0A1B0GTD5 131 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 NDUFAF8A1L188 74 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 IL4P05112 153 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 PSMB2P49721 201 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 ATXN8Q156A1 80 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 Q6ZRP5 223 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 PRNTQ86SH4 94 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 C5orf56Q8N8D9 126 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 C10orf105Q8TEF2 133 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 LEAP2Q969E1 77 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 DPH3P1Q9H4G8 78 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 ZNF292O60281 2723 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 TMSB15BA0A087X1C1 80 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 LOC107984640A0A0U1RRK4 108 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 I3L3M4 83 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 SNCGO76070 127 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 CKS2P33552 79 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 PMAIP1Q13794 54 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 DEFB114Q30KQ6 69 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 FAM223BA6NKX1 122 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 A8MWV9 139 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 H3BVH4 76 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 ERHP84090 104 aaKnown RBP1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 FAM223AQ8IWN6 122 aa1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 RPL39LQ96EH5 51 aaKnown RBP1.7□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGKV2-40A0A087WW87 121 aaPredicted RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 NDUFC2O95298 119 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGKV2D-40P01614 121 aaPredicted RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 PRB4P10163 310 aaPredicted RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 LYRM7Q5U5X0 104 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 LINC00477Q96M19 166 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 URB1O60287 2271 aaKnown RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 FBN2P35556 2912 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3OR16-12A0A075B7B8 117 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 H3BMM0 161 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 J3KT08 172 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 J3QQQ9 107 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 IGHV3-30-3P0DP02 117 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 RPL27AP46776 148 aaKnown RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 DAD1P61803 113 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 PRR15Q8IV56 129 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 UBE2WQ96B02 151 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 LAMTOR3Q9UHA4 124 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 NOTCH2Q04721 2471 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 COL12A1Q99715 3063 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 ABCA1O95477 2261 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 TRGV5A0A0B4J1U4 118 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 A0A0J9YWU9 116 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 E7EQL1 145 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 M0R3E3 92 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 NDUFA4O00483 81 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 Q1T7F1 81 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 DEFB112Q30KQ8 113 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 MEIG1Q5JSS6 88 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 MUSTN1Q8IVN3 82 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 Q8NDZ9 215 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 OPRPNQ99935 248 aaPredicted RBP1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 SVILO95425 2214 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 TACC2O95359 2948 aa1.69□□□□□ -2.14
CDC42EP3-205ENST00000494083 RBMY1BA6NDE4 496 aaKnown RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 RBMY1EA6NEQ0 496 aaKnown RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 H0Y9J4 135 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 RBMY1DP0C7P1 496 aaKnown RBP1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 SCGB1C2P0DMR2 95 aa1.68□□□□□ -2.14
CDC42EP3-205ENST00000494083 REG3GQ6UW15 175 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms