RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 NBDYA0A0U1RRE5 68 aa7.66□□□□□ -1.18
MCF2L-231ENST00000494043 HERVK_113P63121 156 aa7.66□□□□□ -1.18
MCF2L-231ENST00000494043 COX6A2Q02221 97 aa7.66□□□□□ -1.18
MCF2L-231ENST00000494043 ATOH7Q8N100 152 aa7.66□□□□□ -1.18
MCF2L-231ENST00000494043 CHCHD10Q8WYQ3 142 aaPredicted RBP7.66□□□□□ -1.18
MCF2L-231ENST00000494043 DNAH6Q9C0G6 4158 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 TRAV8-3A0A0A6YYJ7 113 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 LY6G6CO95867 125 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 SMIM6P0DI80 62 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
MCF2L-231ENST00000494043 XCL1P47992 114 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 LINC00469Q8N7U9 141 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 Q9HAA7 133 aa7.65□□□□□ -1.18
MCF2L-231ENST00000494043 TMEM170BQ5T4T1 132 aa7.64□□□□□ -1.19
MCF2L-231ENST00000494043 CD164L2Q6UWJ8 174 aa7.64□□□□□ -1.19
MCF2L-231ENST00000494043 C1orf43Q9BWL3 253 aa7.64□□□□□ -1.19
MCF2L-231ENST00000494043 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 IGHV3OR16-9A0A0B4J2B5 98 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 FOXI1Q12951 378 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 RMI2Q96E14 147 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 CDKN2A-AS1Q9UH64 79 aa7.63□□□□□ -1.19
MCF2L-231ENST00000494043 H3BRM9 83 aa7.62□□□□□ -1.19
MCF2L-231ENST00000494043 KRTAP26-1Q6PEX3 210 aa7.62□□□□□ -1.19
MCF2L-231ENST00000494043 A0A087WZ39 114 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 hDV102S1A0JD36 115 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 TMEM223A0PJW6 202 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 M0R2N4 97 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 COX7A2LO14548 114 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 MAJINQ3KP22 176 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 Q6ZR54 194 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 C5orf38Q86SI9 138 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 STPG4Q8N801 248 aa7.61□□□□□ -1.19
MCF2L-231ENST00000494043 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 HSBP1L1C9JCN9 74 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 HERVK_113P61574 105 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 VAMP8Q9BV40 100 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 COX11Q9Y6N1 276 aa7.6□□□□□ -1.19
MCF2L-231ENST00000494043 SACSQ9NZJ4 4579 aa7.59□□□□□ -1.19
MCF2L-231ENST00000494043 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
MCF2L-231ENST00000494043 TM2D2Q9BX73 214 aa7.59□□□□□ -1.19
MCF2L-231ENST00000494043 IGHV3-64A0A075B6Q5 118 aa7.58□□□□□ -1.2
MCF2L-231ENST00000494043 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
MCF2L-231ENST00000494043 LCE6AA0A183 80 aa7.58□□□□□ -1.2
MCF2L-231ENST00000494043 E9PLD3 99 aa7.58□□□□□ -1.2
MCF2L-231ENST00000494043 MALP21145 153 aa7.58□□□□□ -1.2
MCF2L-231ENST00000494043 PAM16Q9Y3D7 125 aa7.58□□□□□ -1.2
MCF2L-231ENST00000494043 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
MCF2L-231ENST00000494043 LEPROTO15243 131 aa7.57□□□□□ -1.2
MCF2L-231ENST00000494043 S100A12P80511 92 aa7.57□□□□□ -1.2
MCF2L-231ENST00000494043 SPATA45Q537H7 98 aa7.57□□□□□ -1.2
MCF2L-231ENST00000494043 Q6ZRN7 208 aaPredicted RBP7.57□□□□□ -1.2
MCF2L-231ENST00000494043 C12orf57Q99622 126 aa7.57□□□□□ -1.2
MCF2L-231ENST00000494043 KMT2AQ03164 3969 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 APOMO95445 188 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 C6orf223Q8N319 242 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 PLEKHB2Q96CS7 222 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
MCF2L-231ENST00000494043 PSCAO43653 123 aa7.55□□□□□ -1.2
MCF2L-231ENST00000494043 NMUP48645 174 aa7.55□□□□□ -1.2
MCF2L-231ENST00000494043 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
MCF2L-231ENST00000494043 ORAOV1Q8WV07 137 aa7.55□□□□□ -1.2
MCF2L-231ENST00000494043 DNAH2Q9P225 4427 aa7.54□□□□□ -1.2
MCF2L-231ENST00000494043 J3QQQ9 107 aa7.54□□□□□ -1.2
MCF2L-231ENST00000494043 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
MCF2L-231ENST00000494043 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
MCF2L-231ENST00000494043 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
MCF2L-231ENST00000494043 COX7B2Q8TF08 81 aa7.54□□□□□ -1.2
MCF2L-231ENST00000494043 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
MCF2L-231ENST00000494043 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
MCF2L-231ENST00000494043 SPAG11BQ08648 103 aa7.53□□□□□ -1.2
MCF2L-231ENST00000494043 Q8IZM0 81 aa7.53□□□□□ -1.2
MCF2L-231ENST00000494043 TOMM7Q9P0U1 55 aa7.53□□□□□ -1.2
MCF2L-231ENST00000494043 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
MCF2L-231ENST00000494043 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
MCF2L-231ENST00000494043 PRSS2P07478 247 aa7.52□□□□□ -1.21
MCF2L-231ENST00000494043 KIAA0087Q14695 138 aa7.52□□□□□ -1.21
MCF2L-231ENST00000494043 HIGD2BQ4VC39 106 aa7.52□□□□□ -1.21
MCF2L-231ENST00000494043 PCP2Q8IVA1 136 aa7.52□□□□□ -1.21
MCF2L-231ENST00000494043 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.21
MCF2L-231ENST00000494043 RYR2Q92736 4967 aa7.51□□□□□ -1.21
MCF2L-231ENST00000494043 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
MCF2L-231ENST00000494043 LECT2O14960 151 aa7.51□□□□□ -1.21
MCF2L-231ENST00000494043 COX8AP10176 69 aa7.51□□□□□ -1.21
MCF2L-231ENST00000494043 WFDC2Q14508 124 aa7.51□□□□□ -1.21
MCF2L-231ENST00000494043 C6orf226Q5I0X4 101 aa7.51□□□□□ -1.21
MCF2L-231ENST00000494043 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
MCF2L-231ENST00000494043 LRCOL1A6NCL2 159 aa7.5□□□□□ -1.21
MCF2L-231ENST00000494043 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
MCF2L-231ENST00000494043 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
MCF2L-231ENST00000494043 NDUFA1O15239 70 aa7.5□□□□□ -1.21
MCF2L-231ENST00000494043 CXCL5P42830 114 aa7.5□□□□□ -1.21
MCF2L-231ENST00000494043 ZNF625Q96I27 306 aaPredicted RBP7.5□□□□□ -1.21
MCF2L-231ENST00000494043 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms