RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 MRPS36P82909 103 aaKnown RBP7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE2BQ13066 116 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 ZNRF2Q8NHG8 242 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 VPS13DQ5THJ4 4388 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 C9JAW5 83 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 F5H697 171 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 GNRH2O43555 120 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 ACYP1P07311 99 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 UNQ9165/PRO28630Q6UXU0 137 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 DCANP1Q8TF63 244 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 TRAV2A0A0B4J234 112 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 H3BMM0 161 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 CFHR3Q02985 330 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 ZNF56Q15929 161 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 IGLV4-3A0A075B6K6 122 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 RPL39P62891 51 aaKnown RBP7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 RPL11P62913 178 aaKnown RBP7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 MIAQ16674 131 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 Q6ZQT7 251 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 IMUPQ9GZP8 106 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 A8MTW9 85 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 Q1RN00 199 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 LINC00467Q9BRT7 94 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 RETNQ9HD89 108 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 HERC1Q15751 4861 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 FAT2Q9NYQ8 4349 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 J3KRW8 73 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 K7EQG2 157 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 PSMB8P28062 276 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 SLURP1P55000 103 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 UBE2E2Q96LR5 201 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12JA6NER3 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE7O76087 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 ATP5G1P05496 136 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12FP0CL80 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12GP0CL81 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12IP0CL82 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE4Q13068 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 CLUHP3Q96NS8 147 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 LITAFQ99732 161 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 IGLV5-45A0A087WSX0 123 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 A0A087WWL8 130 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 LST1O00453 97 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TRBV12-3P01733 135 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TIRAPP58753 221 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM19A3Q7Z5A8 133 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 NTN5Q8WTR8 489 aaPredicted RBP7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 VSIG2Q96IQ7 327 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM110AQ9BQ89 295 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 F6UB75 175 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 NDUFA1O15239 70 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 TRIAP1O43715 76 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 IGLV1-51P01701 117 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 TMEM61Q8N0U2 210 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 NDUFA12Q9UI09 145 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 DNAH2Q9P225 4427 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 PKD1P98161 4303 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 NUPR2A6NF83 97 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 ZNF415Q09FC8 603 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM74A4Q5TZK3 123 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 OVOL2Q9BRP0 275 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 SPXQ9BT56 116 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 HSPG2P98160 4391 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 EMP1P54849 157 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 TMEM101Q96IK0 257 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 TMEM126AQ9H061 195 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 TNFRSF18Q9Y5U5 241 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 FAM222AQ5U5X8 452 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 JPT2Q9H910 190 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 H7C423 109 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 IGHV3-11P01762 117 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms