RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 MRPS36P82909 103 aaKnown RBP7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE2BQ13066 116 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 ZNRF2Q8NHG8 242 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 VPS13DQ5THJ4 4388 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 C9JAW5 83 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 F5H697 171 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 GNRH2O43555 120 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 ACYP1P07311 99 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 UNQ9165/PRO28630Q6UXU0 137 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 DCANP1Q8TF63 244 aa7.67□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 TRAV2A0A0B4J234 112 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 H3BMM0 161 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 CFHR3Q02985 330 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 ZNF56Q15929 161 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
PDLIM1-205ENST00000493949 IGLV4-3A0A075B6K6 122 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 RPL39P62891 51 aaKnown RBP7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 RPL11P62913 178 aaKnown RBP7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 MIAQ16674 131 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 Q6ZQT7 251 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 IMUPQ9GZP8 106 aa7.65□□□□□ -1.18
PDLIM1-205ENST00000493949 A8MTW9 85 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 Q1RN00 199 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 LINC00467Q9BRT7 94 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 RETNQ9HD89 108 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 HERC1Q15751 4861 aa7.64□□□□□ -1.19
PDLIM1-205ENST00000493949 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 FAT2Q9NYQ8 4349 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 J3KRW8 73 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 K7EQG2 157 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 PSMB8P28062 276 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 SLURP1P55000 103 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 UBE2E2Q96LR5 201 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12JA6NER3 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE7O76087 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 ATP5G1P05496 136 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12FP0CL80 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12GP0CL81 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE12IP0CL82 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 GAGE4Q13068 117 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 CLUHP3Q96NS8 147 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 LITAFQ99732 161 aa7.62□□□□□ -1.19
PDLIM1-205ENST00000493949 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 IGLV5-45A0A087WSX0 123 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 A0A087WWL8 130 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 LST1O00453 97 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TRBV12-3P01733 135 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 TIRAPP58753 221 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM19A3Q7Z5A8 133 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 NTN5Q8WTR8 489 aaPredicted RBP7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 VSIG2Q96IQ7 327 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM110AQ9BQ89 295 aa7.61□□□□□ -1.19
PDLIM1-205ENST00000493949 F6UB75 175 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 NDUFA1O15239 70 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 TRIAP1O43715 76 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 IGLV1-51P01701 117 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 TMEM61Q8N0U2 210 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 NDUFA12Q9UI09 145 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 DNAH2Q9P225 4427 aa7.6□□□□□ -1.19
PDLIM1-205ENST00000493949 PKD1P98161 4303 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 NUPR2A6NF83 97 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 ZNF415Q09FC8 603 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 FAM74A4Q5TZK3 123 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 OVOL2Q9BRP0 275 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 SPXQ9BT56 116 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
PDLIM1-205ENST00000493949 HSPG2P98160 4391 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 EMP1P54849 157 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 TMEM101Q96IK0 257 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 TMEM126AQ9H061 195 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 TNFRSF18Q9Y5U5 241 aa7.58□□□□□ -1.2
PDLIM1-205ENST00000493949 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 FAM222AQ5U5X8 452 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 JPT2Q9H910 190 aa7.57□□□□□ -1.2
PDLIM1-205ENST00000493949 H7C423 109 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 IGHV3-11P01762 117 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms