RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 IGIPA6NJ69 53 aa5.68□□□□□ -1.5
BRCA1-221ENST00000493795 BRWD1-AS2P59051 145 aa5.68□□□□□ -1.5
BRCA1-221ENST00000493795 C10orf99Q6UWK7 81 aa5.68□□□□□ -1.5
BRCA1-221ENST00000493795 PLA2G5P39877 138 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 ZSWIM8A7E2V4 1837 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 CACNA1EQ15878 2313 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
BRCA1-221ENST00000493795 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 Q9UF83 564 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 LY6G6DO95868 133 aa5.67□□□□□ -1.5
BRCA1-221ENST00000493795 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 C1orf229Q6ZS94 237 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-221ENST00000493795 ZNF295-AS1Q8N0V1 137 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 ZNF407Q9C0G0 2248 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 C19orf84I3L1E1 186 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 COX6A2Q02221 97 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 C6orf48Q9UBA6 75 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 SBF1O95248 1867 aa5.66□□□□□ -1.5
BRCA1-221ENST00000493795 SMIM29Q86T20 159 aa5.65□□□□□ -1.5
BRCA1-221ENST00000493795 LINC01006Q8NI28 216 aa5.65□□□□□ -1.5
BRCA1-221ENST00000493795 Q8N2B8 174 aa5.65□□□□□ -1.5
BRCA1-221ENST00000493795 PLXNA2O75051 1894 aa5.65□□□□□ -1.51
BRCA1-221ENST00000493795 MALRD1Q5VYJ5 2156 aa5.65□□□□□ -1.51
BRCA1-221ENST00000493795 GTF3C1Q12789 2109 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 TCF20Q9UGU0 1960 aaKnown RBP5.64□□□□□ -1.51
BRCA1-221ENST00000493795 PRM2P04554 102 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 CACNA1BQ00975 2339 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 SIPA1L1O43166 1804 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 GAS8-AS1O95177 125 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 C1orf134Q5TEV5 83 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 C18orf65Q6ZTR6 163 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 CNFNQ9BYD5 112 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 Q8NA96 180 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 COL6A6A6NMZ7 2263 aa5.64□□□□□ -1.51
BRCA1-221ENST00000493795 PKDREJQ9NTG1 2253 aa5.63□□□□□ -1.51
BRCA1-221ENST00000493795 RLFQ13129 1914 aa5.63□□□□□ -1.51
BRCA1-221ENST00000493795 IGLV1-40P01703 118 aa5.63□□□□□ -1.51
BRCA1-221ENST00000493795 OBSL1O75147 1896 aa5.63□□□□□ -1.51
BRCA1-221ENST00000493795 IGLV4-60A0A075B6I1 120 aa5.63□□□□□ -1.51
BRCA1-221ENST00000493795 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
BRCA1-221ENST00000493795 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
BRCA1-221ENST00000493795 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
BRCA1-221ENST00000493795 DSCAML1Q8TD84 2053 aa5.62□□□□□ -1.51
BRCA1-221ENST00000493795 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
BRCA1-221ENST00000493795 WNK2Q9Y3S1 2297 aa5.62□□□□□ -1.51
BRCA1-221ENST00000493795 PLXND1Q9Y4D7 1925 aa5.62□□□□□ -1.51
BRCA1-221ENST00000493795 H3BPC8 53 aa5.61□□□□□ -1.51
BRCA1-221ENST00000493795 SSBP3-AS1Q7Z2R9 100 aa5.61□□□□□ -1.51
BRCA1-221ENST00000493795 SIP14410 1827 aa5.61□□□□□ -1.51
BRCA1-221ENST00000493795 BCE1O60756 84 aa5.61□□□□□ -1.51
BRCA1-221ENST00000493795 THSD7BQ9C0I4 1608 aa5.61□□□□□ -1.51
BRCA1-221ENST00000493795 AMELXQ99217 191 aa5.61□□□□□ -1.51
BRCA1-221ENST00000493795 C11orf71Q6IPW1 123 aa5.6□□□□□ -1.51
BRCA1-221ENST00000493795 NOTCH3Q9UM47 2321 aa5.6□□□□□ -1.51
BRCA1-221ENST00000493795 HELZP42694 1942 aaKnown RBP5.6□□□□□ -1.51
BRCA1-221ENST00000493795 FHL2Q14192 279 aa5.6□□□□□ -1.51
BRCA1-221ENST00000493795 Q6ZPA2 131 aa5.6□□□□□ -1.51
BRCA1-221ENST00000493795 PCNX2A6NKB5 2137 aa5.6□□□□□ -1.51
BRCA1-221ENST00000493795 OXLD1Q5BKU9 147 aa5.6□□□□□ -1.51
BRCA1-221ENST00000493795 DENND4AQ7Z401 1863 aa5.59□□□□□ -1.51
BRCA1-221ENST00000493795 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
BRCA1-221ENST00000493795 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
BRCA1-221ENST00000493795 PLCE1Q9P212 2302 aa5.59□□□□□ -1.51
BRCA1-221ENST00000493795 FNDC1Q4ZHG4 1894 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-221ENST00000493795 VWA8A3KMH1 1905 aa5.59□□□□□ -1.51
BRCA1-221ENST00000493795 ROS1P08922 2347 aa5.59□□□□□ -1.51
BRCA1-221ENST00000493795 C22orf24Q9Y442 160 aa5.59□□□□□ -1.52
BRCA1-221ENST00000493795 SPTAN1Q13813 2472 aaKnown RBP5.58□□□□□ -1.52
BRCA1-221ENST00000493795 CACNA1GO43497 2377 aa5.58□□□□□ -1.52
BRCA1-221ENST00000493795 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
BRCA1-221ENST00000493795 KIAA0087Q14695 138 aa5.58□□□□□ -1.52
BRCA1-221ENST00000493795 MED13Q9UHV7 2174 aa5.58□□□□□ -1.52
BRCA1-221ENST00000493795 IGLV8-61A0A075B6I0 122 aa5.58□□□□□ -1.52
BRCA1-221ENST00000493795 ODF3L2Q3SX64 289 aa5.58□□□□□ -1.52
BRCA1-221ENST00000493795 FRMPD3Q5JV73 1810 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 Q6ZRU5 148 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 SPATA3Q8NHX4 192 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 A0A1W2PNU3 283 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-221ENST00000493795 BRI3O95415 125 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
BRCA1-221ENST00000493795 A8MTW9 85 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 WISP2O76076 250 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 A0A1B0GW54 56 aa5.57□□□□□ -1.52
BRCA1-221ENST00000493795 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
BRCA1-221ENST00000493795 TRAV22A0A0B4J277 110 aa5.56□□□□□ -1.52
BRCA1-221ENST00000493795 MOBPQ13875 183 aa5.56□□□□□ -1.52
BRCA1-221ENST00000493795 TNCP24821 2201 aa5.56□□□□□ -1.52
BRCA1-221ENST00000493795 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
BRCA1-221ENST00000493795 ZNF580Q9UK33 172 aa5.55□□□□□ -1.52
BRCA1-221ENST00000493795 LINC00313P59037 77 aa5.55□□□□□ -1.52
BRCA1-221ENST00000493795 ZGRF1Q86YA3 2104 aa5.55□□□□□ -1.52
BRCA1-221ENST00000493795 IGLV1-51P01701 117 aa5.55□□□□□ -1.52
BRCA1-221ENST00000493795 ACACAQ13085 2346 aa5.55□□□□□ -1.52
BRCA1-221ENST00000493795 C11orf72Q8NBR9 251 aa5.54□□□□□ -1.52
BRCA1-221ENST00000493795 BRWD3Q6RI45 1802 aa5.54□□□□□ -1.52
BRCA1-221ENST00000493795 CDIP1Q9H305 208 aa5.54□□□□□ -1.52
BRCA1-221ENST00000493795 GVINP1Q7Z2Y8 2422 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms