RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 J3QL48 77 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 K7EMI3 77 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 G0S2P27469 103 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 FA2HQ7L5A8 372 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 LINC00526Q96FQ7 95 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 DPH3Q96FX2 82 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 PYGO1Q9Y3Y4 419 aa6.73□□□□□ -1.33
TRAPPC12-222ENST00000493792 GVQW2A0A096LPI5 108 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC12-222ENST00000493792 CNBPP62633 177 aaKnown RBP6.72□□□□□ -1.33
TRAPPC12-222ENST00000493792 TEX43Q6ZNM6 134 aa6.72□□□□□ -1.33
TRAPPC12-222ENST00000493792 Q6ZSA8 131 aa6.72□□□□□ -1.33
TRAPPC12-222ENST00000493792 C2orf88Q9BSF0 95 aa6.72□□□□□ -1.33
TRAPPC12-222ENST00000493792 VCX2Q9H322 139 aa6.72□□□□□ -1.33
TRAPPC12-222ENST00000493792 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 FAM229AH3BQW9 127 aa6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 APOMO95445 188 aa6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 SLPIP03973 132 aa6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 FAM104AQ969W3 186 aa6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 CHAC1Q9BUX1 264 aa6.71□□□□□ -1.34
TRAPPC12-222ENST00000493792 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
TRAPPC12-222ENST00000493792 ZC2HC1BQ5TFG8 222 aa6.7□□□□□ -1.34
TRAPPC12-222ENST00000493792 CBLN2Q8IUK8 224 aa6.7□□□□□ -1.34
TRAPPC12-222ENST00000493792 CARD19Q96LW7 228 aa6.7□□□□□ -1.34
TRAPPC12-222ENST00000493792 SCGB3A1Q96QR1 104 aa6.7□□□□□ -1.34
TRAPPC12-222ENST00000493792 IGLV4-69A0A075B6H9 119 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 SPAG11BQ08648 103 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 SERTAD4-AS1Q5TG53 156 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 ORAOV1Q8WV07 137 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 TOMM6Q96B49 74 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
TRAPPC12-222ENST00000493792 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 COX6A2Q02221 97 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 CIRBP-AS1Q8TBR5 109 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC12-222ENST00000493792 IGHV3OR16-9A0A0B4J2B5 98 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 PANO1I0J062 215 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 UBE2D1P51668 147 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 LINC00242Q5T6M2 205 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 ERASQ7Z444 233 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 C18orf32Q8TCD1 76 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
TRAPPC12-222ENST00000493792 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 NPSP0C0P6 89 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 LINC00614P0C842 121 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 MAJINQ3KP22 176 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 Q6ZRU5 148 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 LINC00173Q6ZV60 143 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 OR10D4PQ8NGN7 298 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 YPEL4Q96NS1 127 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 AMELXQ99217 191 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
TRAPPC12-222ENST00000493792 LINC01546A6NGU7 62 aa6.65□□□□□ -1.34
TRAPPC12-222ENST00000493792 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
TRAPPC12-222ENST00000493792 NDUFA6P56556 154 aa6.65□□□□□ -1.34
TRAPPC12-222ENST00000493792 RAB5BP61020 215 aa6.65□□□□□ -1.34
TRAPPC12-222ENST00000493792 PMCHL1Q16048 86 aa6.65□□□□□ -1.34
TRAPPC12-222ENST00000493792 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
TRAPPC12-222ENST00000493792 A0A087WZ39 114 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 PRSS2P07478 247 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 HERVK_113P63121 156 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 SEC11AP67812 179 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 GAGE2BQ13066 116 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 PACRGQ96M98 296 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 TOMM7Q9P0U1 55 aa6.64□□□□□ -1.35
TRAPPC12-222ENST00000493792 A0A087WYN8 130 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 A0A096LNI7 61 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 LOC107984640A0A0U1RRK4 108 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 NDUFA1O15239 70 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 HBDP02042 147 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 LINC00469Q8N7U9 141 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 URB1-AS1Q96HZ7 61 aa6.63□□□□□ -1.35
TRAPPC12-222ENST00000493792 PMVKQ15126 192 aa6.62□□□□□ -1.35
TRAPPC12-222ENST00000493792 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
TRAPPC12-222ENST00000493792 BAGE3Q86Y29 109 aa6.62□□□□□ -1.35
TRAPPC12-222ENST00000493792 STPG4Q8N801 248 aa6.62□□□□□ -1.35
TRAPPC12-222ENST00000493792 CST9LQ9H4G1 147 aa6.62□□□□□ -1.35
TRAPPC12-222ENST00000493792 TRGC2P03986 189 aa6.61□□□□□ -1.35
TRAPPC12-222ENST00000493792 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
TRAPPC12-222ENST00000493792 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
TRAPPC12-222ENST00000493792 LINC00474Q9P2X8 69 aa6.61□□□□□ -1.35
TRAPPC12-222ENST00000493792 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
TRAPPC12-222ENST00000493792 A0A096LNJ9 63 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 TINCRA0A1B0GVN0 87 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 F8WDY8 70 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 ATP5LO75964 103 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms