RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 C20orf78Q9BR46 151 aa13.64□□□□□ -0.23
HMG20B-214ENST00000493191 UNQ6190/PRO20217Q6UXQ8 127 aa13.63□□□□□ -0.23
HMG20B-214ENST00000493191 FAM19A5Q7Z5A7 132 aaPredicted RBP13.63□□□□□ -0.23
HMG20B-214ENST00000493191 F8WDY8 70 aa13.62□□□□□ -0.23
HMG20B-214ENST00000493191 H0Y9J4 135 aa13.62□□□□□ -0.23
HMG20B-214ENST00000493191 TRBV24-1A0A075B6N3 115 aa13.61□□□□□ -0.23
HMG20B-214ENST00000493191 CKS2P33552 79 aa13.61□□□□□ -0.23
HMG20B-214ENST00000493191 GAGE2EQ4V326 116 aa13.61□□□□□ -0.23
HMG20B-214ENST00000493191 C6orf48Q9UBA6 75 aa13.61□□□□□ -0.23
HMG20B-214ENST00000493191 GAGE2DQ9UEU5 116 aa13.61□□□□□ -0.23
HMG20B-214ENST00000493191 LINC00862A6NCI5 91 aa13.6□□□□□ -0.23
HMG20B-214ENST00000493191 TNFRSF6BO95407 300 aa13.6□□□□□ -0.23
HMG20B-214ENST00000493191 TLX1NBP0CAT3 122 aa13.6□□□□□ -0.23
HMG20B-214ENST00000493191 RPL32P62910 135 aaKnown RBP13.6□□□□□ -0.23
HMG20B-214ENST00000493191 TMEM241Q24JQ0 296 aa13.6□□□□□ -0.23
HMG20B-214ENST00000493191 FAM74A3Q4VXF1 159 aa13.6□□□□□ -0.23
HMG20B-214ENST00000493191 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
HMG20B-214ENST00000493191 TCAPO15273 167 aa13.59□□□□□ -0.23
HMG20B-214ENST00000493191 IFITM10A6NMD0 228 aa13.58□□□□□ -0.24
HMG20B-214ENST00000493191 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
HMG20B-214ENST00000493191 HBBP68871 147 aa13.58□□□□□ -0.24
HMG20B-214ENST00000493191 MRPS36P82909 103 aaKnown RBP13.58□□□□□ -0.24
HMG20B-214ENST00000493191 AKAP14Q86UN6 197 aa13.58□□□□□ -0.24
HMG20B-214ENST00000493191 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.24
HMG20B-214ENST00000493191 SMIM2Q9BVW6 85 aa13.58□□□□□ -0.24
HMG20B-214ENST00000493191 SMIM27A0A1W2PRY6 76 aa13.57□□□□□ -0.24
HMG20B-214ENST00000493191 ADIRFQ15847 76 aa13.57□□□□□ -0.24
HMG20B-214ENST00000493191 SMDT1Q9H4I9 107 aa13.57□□□□□ -0.24
HMG20B-214ENST00000493191 IGLV1-50A0A075B6I6 118 aa13.56□□□□□ -0.24
HMG20B-214ENST00000493191 D6R8Y8 96 aa13.56□□□□□ -0.24
HMG20B-214ENST00000493191 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
HMG20B-214ENST00000493191 TGIF2-C20orf24A0A0A6YYL0 155 aa13.54□□□□□ -0.24
HMG20B-214ENST00000493191 A0A1B0GW15 77 aa13.54□□□□□ -0.24
HMG20B-214ENST00000493191 M0QXV9 152 aa13.54□□□□□ -0.24
HMG20B-214ENST00000493191 NPYP01303 97 aa13.54□□□□□ -0.24
HMG20B-214ENST00000493191 UBE2BP63146 152 aa13.54□□□□□ -0.24
HMG20B-214ENST00000493191 KIAA0087Q14695 138 aa13.54□□□□□ -0.24
HMG20B-214ENST00000493191 MRPL54Q6P161 138 aaKnown RBP13.52□□□□□ -0.25
HMG20B-214ENST00000493191 C2orf82Q6UX34 121 aa13.52□□□□□ -0.25
HMG20B-214ENST00000493191 NAT8Q9UHE5 227 aa13.52□□□□□ -0.25
HMG20B-214ENST00000493191 UBE2D1P51668 147 aa13.51□□□□□ -0.25
HMG20B-214ENST00000493191 MUC2Q02817 5179 aa13.51□□□□□ -0.25
HMG20B-214ENST00000493191 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
HMG20B-214ENST00000493191 C9JQL5 133 aa13.5□□□□□ -0.25
HMG20B-214ENST00000493191 PRR4Q16378 134 aa13.5□□□□□ -0.25
HMG20B-214ENST00000493191 LINC00242Q5T6M2 205 aa13.5□□□□□ -0.25
HMG20B-214ENST00000493191 TRBV30A0A0K0K1B3 111 aa13.49□□□□□ -0.25
HMG20B-214ENST00000493191 F8W036 122 aa13.49□□□□□ -0.25
HMG20B-214ENST00000493191 IFI27P40305 119 aaPredicted RBP13.49□□□□□ -0.25
HMG20B-214ENST00000493191 C9orf129Q5T035 196 aaKnown RBP13.49□□□□□ -0.25
HMG20B-214ENST00000493191 NDUFC2-KCTD14E9PQ53 114 aa13.48□□□□□ -0.25
HMG20B-214ENST00000493191 S100A8P05109 93 aa13.47□□□□□ -0.25
HMG20B-214ENST00000493191 RAB5AP20339 215 aa13.47□□□□□ -0.25
HMG20B-214ENST00000493191 IGLV4-3A0A075B6K6 122 aa13.46□□□□□ -0.25
HMG20B-214ENST00000493191 A0A1B0GXF2 115 aa13.46□□□□□ -0.25
HMG20B-214ENST00000493191 PPBPP02775 128 aa13.46□□□□□ -0.25
HMG20B-214ENST00000493191 RPL13AP40429 203 aaKnown RBP13.46□□□□□ -0.25
HMG20B-214ENST00000493191 PACRGQ96M98 296 aaPredicted RBP13.46□□□□□ -0.25
HMG20B-214ENST00000493191 PYGO1Q9Y3Y4 419 aa13.45□□□□□ -0.26
HMG20B-214ENST00000493191 SRSF3P84103 164 aaKnown RBP13.44□□□□□ -0.26
HMG20B-214ENST00000493191 TMEM141Q96I45 108 aa13.44□□□□□ -0.26
HMG20B-214ENST00000493191 TMEM136Q6ZRR5 245 aa13.43□□□□□ -0.26
HMG20B-214ENST00000493191 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
HMG20B-214ENST00000493191 ZC2HC1BQ5TFG8 222 aa13.42□□□□□ -0.26
HMG20B-214ENST00000493191 PRELID3AQ96N28 172 aa13.42□□□□□ -0.26
HMG20B-214ENST00000493191 ZNF861PO60384 105 aa13.41□□□□□ -0.26
HMG20B-214ENST00000493191 TEX43Q6ZNM6 134 aa13.41□□□□□ -0.26
HMG20B-214ENST00000493191 CARHSP1Q9Y2V2 147 aaKnown RBP13.41□□□□□ -0.26
HMG20B-214ENST00000493191 PEA15Q15121 130 aa13.4□□□□□ -0.26
HMG20B-214ENST00000493191 LINC00469Q8N7U9 141 aa13.4□□□□□ -0.26
HMG20B-214ENST00000493191 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
HMG20B-214ENST00000493191 LINC01561Q8N1V8 128 aa13.39□□□□□ -0.27
HMG20B-214ENST00000493191 TOMM7Q9P0U1 55 aa13.39□□□□□ -0.27
HMG20B-214ENST00000493191 TSPAN13O95857 204 aa13.38□□□□□ -0.27
HMG20B-214ENST00000493191 PRSS2P07478 247 aa13.38□□□□□ -0.27
HMG20B-214ENST00000493191 C2orf88Q9BSF0 95 aa13.38□□□□□ -0.27
HMG20B-214ENST00000493191 C22orf24Q9Y442 160 aa13.38□□□□□ -0.27
HMG20B-214ENST00000493191 CKS1BP61024 79 aa13.37□□□□□ -0.27
HMG20B-214ENST00000493191 LINC00173Q6ZV60 143 aa13.36□□□□□ -0.27
HMG20B-214ENST00000493191 XAGE1AQ9HD64 81 aa13.36□□□□□ -0.27
HMG20B-214ENST00000493191 PRSS47A8MTI9 375 aa13.35□□□□□ -0.27
HMG20B-214ENST00000493191 NUPR1O60356 82 aa13.35□□□□□ -0.27
HMG20B-214ENST00000493191 C6orf226Q5I0X4 101 aa13.35□□□□□ -0.27
HMG20B-214ENST00000493191 Q6ZN92 141 aa13.35□□□□□ -0.27
HMG20B-214ENST00000493191 ATP5L2Q7Z4Y8 100 aa13.35□□□□□ -0.27
HMG20B-214ENST00000493191 VCX2Q9H322 139 aa13.35□□□□□ -0.27
HMG20B-214ENST00000493191 C2orf66Q6UXQ4 117 aa13.34□□□□□ -0.27
HMG20B-214ENST00000493191 AMELXQ99217 191 aa13.34□□□□□ -0.27
HMG20B-214ENST00000493191 CTDSP1Q9GZU7 261 aa13.34□□□□□ -0.27
HMG20B-214ENST00000493191 MAP1LC3AQ9H492 121 aa13.34□□□□□ -0.27
HMG20B-214ENST00000493191 CYSLTR1Q9Y271 337 aa13.34□□□□□ -0.27
HMG20B-214ENST00000493191 LBHQ53QV2 105 aaPredicted RBP13.32□□□□□ -0.28
HMG20B-214ENST00000493191 Q8IZM0 81 aa13.32□□□□□ -0.28
HMG20B-214ENST00000493191 ALKBH7Q9BT30 221 aaPredicted RBP13.32□□□□□ -0.28
HMG20B-214ENST00000493191 Q8N8P6 123 aa13.31□□□□□ -0.28
HMG20B-214ENST00000493191 LAMTOR2Q9Y2Q5 125 aa13.31□□□□□ -0.28
HMG20B-214ENST00000493191 A0A087X002 238 aa13.3□□□□□ -0.28
HMG20B-214ENST00000493191 A0A0U1RQV1 116 aa13.29□□□□□ -0.28
HMG20B-214ENST00000493191 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
HMG20B-214ENST00000493191 MRPL55Q7Z7F7 128 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms