RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SPAG11BQ08648 103 aa7.74□□□□□ -1.17
COL6A1-205ENST00000492851 MRPL54Q6P161 138 aaKnown RBP7.74□□□□□ -1.17
COL6A1-205ENST00000492851 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
COL6A1-205ENST00000492851 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
COL6A1-205ENST00000492851 IGHV3OR16-9A0A0B4J2B5 98 aa7.73□□□□□ -1.17
COL6A1-205ENST00000492851 A0A1B0GXF2 115 aa7.73□□□□□ -1.17
COL6A1-205ENST00000492851 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.73□□□□□ -1.17
COL6A1-205ENST00000492851 IFI27P40305 119 aaPredicted RBP7.73□□□□□ -1.17
COL6A1-205ENST00000492851 SRSF3P84103 164 aaKnown RBP7.73□□□□□ -1.17
COL6A1-205ENST00000492851 TMEM136Q6ZRR5 245 aa7.73□□□□□ -1.17
COL6A1-205ENST00000492851 PYGO1Q9Y3Y4 419 aa7.73□□□□□ -1.17
COL6A1-205ENST00000492851 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
COL6A1-205ENST00000492851 NDUFA1O15239 70 aa7.72□□□□□ -1.17
COL6A1-205ENST00000492851 RPL39P62891 51 aaKnown RBP7.72□□□□□ -1.17
COL6A1-205ENST00000492851 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
COL6A1-205ENST00000492851 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
COL6A1-205ENST00000492851 ORAOV1Q8WV07 137 aa7.72□□□□□ -1.17
COL6A1-205ENST00000492851 LAMTOR2Q9Y2Q5 125 aa7.72□□□□□ -1.17
COL6A1-205ENST00000492851 TGIF2-C20orf24A0A0A6YYL0 155 aa7.71□□□□□ -1.18
COL6A1-205ENST00000492851 IFITM10A6NMD0 228 aa7.71□□□□□ -1.18
COL6A1-205ENST00000492851 NPYP01303 97 aa7.71□□□□□ -1.18
COL6A1-205ENST00000492851 MT-ND6P03923 174 aa7.71□□□□□ -1.18
COL6A1-205ENST00000492851 KRTAP10-8P60410 259 aa7.71□□□□□ -1.18
COL6A1-205ENST00000492851 PRSS47A8MTI9 375 aa7.7□□□□□ -1.18
COL6A1-205ENST00000492851 TLX1NBP0CAT3 122 aa7.7□□□□□ -1.18
COL6A1-205ENST00000492851 PNRC1Q12796 327 aaPredicted RBP7.7□□□□□ -1.18
COL6A1-205ENST00000492851 PRELID3AQ96N28 172 aa7.7□□□□□ -1.18
COL6A1-205ENST00000492851 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
COL6A1-205ENST00000492851 A0A1B0GVG6 124 aa7.69□□□□□ -1.18
COL6A1-205ENST00000492851 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
COL6A1-205ENST00000492851 PSORS1C2Q9UIG4 136 aa7.69□□□□□ -1.18
COL6A1-205ENST00000492851 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 A0A087WZ39 114 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 K7EMI3 77 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 MT-ND4LP03901 98 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 G0S2P27469 103 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 LINC01561Q8N1V8 128 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 C2orf88Q9BSF0 95 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
COL6A1-205ENST00000492851 NPSP0C0P6 89 aa7.67□□□□□ -1.18
COL6A1-205ENST00000492851 RAB14P61106 215 aa7.67□□□□□ -1.18
COL6A1-205ENST00000492851 C1orf137Q5JT78 98 aa7.67□□□□□ -1.18
COL6A1-205ENST00000492851 Q6ZN92 141 aa7.67□□□□□ -1.18
COL6A1-205ENST00000492851 TEX43Q6ZNM6 134 aa7.67□□□□□ -1.18
COL6A1-205ENST00000492851 IGLV4-3A0A075B6K6 122 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 Q8N8P6 123 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 PACRGQ96M98 296 aaPredicted RBP7.66□□□□□ -1.18
COL6A1-205ENST00000492851 VCX2Q9H322 139 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 CYSLTR1Q9Y271 337 aa7.66□□□□□ -1.18
COL6A1-205ENST00000492851 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.18
COL6A1-205ENST00000492851 PAPPA-AS1Q5QFB9 102 aa7.65□□□□□ -1.18
COL6A1-205ENST00000492851 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.18
COL6A1-205ENST00000492851 SEC11AP67812 179 aa7.64□□□□□ -1.19
COL6A1-205ENST00000492851 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
COL6A1-205ENST00000492851 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
COL6A1-205ENST00000492851 C6orf48Q9UBA6 75 aa7.64□□□□□ -1.19
COL6A1-205ENST00000492851 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 IGLV7-43P04211 117 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 PRSS2P07478 247 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 UBE2D1P51668 147 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 GAGE2EQ4V326 116 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 C2orf66Q6UXQ4 117 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 GAGE2DQ9UEU5 116 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 TNXBP22105 4242 aa7.63□□□□□ -1.19
COL6A1-205ENST00000492851 AMELXQ99217 191 aa7.62□□□□□ -1.19
COL6A1-205ENST00000492851 CTDSP1Q9GZU7 261 aa7.62□□□□□ -1.19
COL6A1-205ENST00000492851 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
COL6A1-205ENST00000492851 CKS1BP61024 79 aa7.61□□□□□ -1.19
COL6A1-205ENST00000492851 C6orf226Q5I0X4 101 aa7.61□□□□□ -1.19
COL6A1-205ENST00000492851 FAM19A3Q7Z5A8 133 aa7.61□□□□□ -1.19
COL6A1-205ENST00000492851 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
COL6A1-205ENST00000492851 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
COL6A1-205ENST00000492851 HERVK_113P63121 156 aa7.6□□□□□ -1.19
COL6A1-205ENST00000492851 UBE2BP63146 152 aa7.6□□□□□ -1.19
COL6A1-205ENST00000492851 FAM19A5Q7Z5A7 132 aaPredicted RBP7.6□□□□□ -1.19
COL6A1-205ENST00000492851 LINC01549A6NIU2 74 aa7.59□□□□□ -1.19
COL6A1-205ENST00000492851 H0Y9J4 135 aa7.59□□□□□ -1.19
COL6A1-205ENST00000492851 ODF1Q14990 250 aa7.59□□□□□ -1.19
COL6A1-205ENST00000492851 Q8IZM0 81 aa7.59□□□□□ -1.19
COL6A1-205ENST00000492851 M0QXV9 152 aa7.58□□□□□ -1.2
COL6A1-205ENST00000492851 C2orf82Q6UX34 121 aa7.58□□□□□ -1.2
COL6A1-205ENST00000492851 TIMM17AQ99595 171 aa7.58□□□□□ -1.2
COL6A1-205ENST00000492851 ALKBH7Q9BT30 221 aaPredicted RBP7.58□□□□□ -1.2
COL6A1-205ENST00000492851 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
COL6A1-205ENST00000492851 IGLV1-50A0A075B6I6 118 aa7.57□□□□□ -1.2
COL6A1-205ENST00000492851 TRAV9-1A0A075B6T8 112 aa7.57□□□□□ -1.2
COL6A1-205ENST00000492851 LBHQ53QV2 105 aaPredicted RBP7.57□□□□□ -1.2
COL6A1-205ENST00000492851 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
COL6A1-205ENST00000492851 CXCL5P42830 114 aa7.56□□□□□ -1.2
COL6A1-205ENST00000492851 CLLU1Q5K131 121 aa7.56□□□□□ -1.2
COL6A1-205ENST00000492851 LINC00173Q6ZV60 143 aa7.56□□□□□ -1.2
COL6A1-205ENST00000492851 F8VRH5 84 aa7.55□□□□□ -1.2
COL6A1-205ENST00000492851 NUPR1O60356 82 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms