RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 MRPL18Q9H0U6 180 aaKnown RBP6.86□□□□□ -1.31
CDC42SE1-206ENST00000492796 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
CDC42SE1-206ENST00000492796 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
CDC42SE1-206ENST00000492796 LCE2BO14633 110 aa6.85□□□□□ -1.31
CDC42SE1-206ENST00000492796 APOMO95445 188 aa6.85□□□□□ -1.31
CDC42SE1-206ENST00000492796 Q6ZN92 141 aa6.85□□□□□ -1.31
CDC42SE1-206ENST00000492796 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
CDC42SE1-206ENST00000492796 CIRBP-AS1Q8TBR5 109 aa6.85□□□□□ -1.31
CDC42SE1-206ENST00000492796 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
CDC42SE1-206ENST00000492796 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
CDC42SE1-206ENST00000492796 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
CDC42SE1-206ENST00000492796 PAPPA-AS1Q5QFB9 102 aa6.84□□□□□ -1.31
CDC42SE1-206ENST00000492796 PRSS3P2Q8NHM4 247 aa6.84□□□□□ -1.31
CDC42SE1-206ENST00000492796 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
CDC42SE1-206ENST00000492796 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.32
CDC42SE1-206ENST00000492796 TGIF2-C20orf24A0A0A6YYL0 155 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 IGHV3OR16-9A0A0B4J2B5 98 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 LINC01546A6NGU7 62 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 C5orf38Q86SI9 138 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 OR10D4PQ8NGN7 298 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 TOMM6Q96B49 74 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 AMELXQ99217 191 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 TIMM17AQ99595 171 aa6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-206ENST00000492796 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 S100A1P23297 94 aa6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 C2orf48Q96LS8 159 aa6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 VCX2Q9H322 139 aa6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
CDC42SE1-206ENST00000492796 IGLV4-69A0A075B6H9 119 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 UBE2D1P51668 147 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 COX6A2Q02221 97 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 SPAG11BQ08648 103 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 FA2HQ7L5A8 372 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 SMCO4Q9NRQ5 59 aa6.81□□□□□ -1.32
CDC42SE1-206ENST00000492796 A0A087WZ39 114 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 F8WDY8 70 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 PANO1I0J062 215 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 INAFM2P0DMQ5 153 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 ERASQ7Z444 233 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 LINC01561Q8N1V8 128 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 ORAOV1Q8WV07 137 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
CDC42SE1-206ENST00000492796 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
CDC42SE1-206ENST00000492796 SEC11AP67812 179 aa6.79□□□□□ -1.32
CDC42SE1-206ENST00000492796 C18orf32Q8TCD1 76 aa6.79□□□□□ -1.32
CDC42SE1-206ENST00000492796 YPEL4Q96NS1 127 aa6.79□□□□□ -1.32
CDC42SE1-206ENST00000492796 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
CDC42SE1-206ENST00000492796 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
CDC42SE1-206ENST00000492796 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
CDC42SE1-206ENST00000492796 HERVK_113P63121 156 aa6.78□□□□□ -1.32
CDC42SE1-206ENST00000492796 ZC2HC1BQ5TFG8 222 aa6.78□□□□□ -1.32
CDC42SE1-206ENST00000492796 Q6ZRU5 148 aa6.78□□□□□ -1.32
CDC42SE1-206ENST00000492796 PLAC8Q9NZF1 115 aa6.78□□□□□ -1.32
CDC42SE1-206ENST00000492796 A0A087WYN8 130 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 A0A096LNI7 61 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 NDUFA1O15239 70 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 RAB5BP61020 215 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 RNF151Q2KHN1 245 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 SLC7A5P1Q8MH63 180 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 DPH3Q96FX2 82 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 FAT1Q14517 4588 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 HERC1Q15751 4861 aa6.77□□□□□ -1.33
CDC42SE1-206ENST00000492796 GHRHP01286 108 aa6.76□□□□□ -1.33
CDC42SE1-206ENST00000492796 LINC00614P0C842 121 aa6.76□□□□□ -1.33
CDC42SE1-206ENST00000492796 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
CDC42SE1-206ENST00000492796 CBLN2Q8IUK8 224 aa6.76□□□□□ -1.33
CDC42SE1-206ENST00000492796 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 HBDP02042 147 aa6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 RPL37AP61513 92 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 STPG4Q8N801 248 aa6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 URB1-AS1Q96HZ7 61 aa6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-206ENST00000492796 A0A096LNJ9 63 aa6.74□□□□□ -1.33
CDC42SE1-206ENST00000492796 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
CDC42SE1-206ENST00000492796 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE1-206ENST00000492796 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
CDC42SE1-206ENST00000492796 PMVKQ15126 192 aa6.74□□□□□ -1.33
CDC42SE1-206ENST00000492796 PACRGQ96M98 296 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE1-206ENST00000492796 IGLV5-45A0A087WSX0 123 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 A0A0J9YXV3 536 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 TRBV30A0A0K0K1B3 111 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 Q8IZM0 81 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 C7orf33Q8WU49 177 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 232.3 ms