RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
COPS3-210ENST00000492672 C15orf56Q8N910 161 aa10.39□□□□□ -0.75
COPS3-210ENST00000492672 EREGO14944 169 aa10.38□□□□□ -0.75
COPS3-210ENST00000492672 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
COPS3-210ENST00000492672 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
COPS3-210ENST00000492672 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
COPS3-210ENST00000492672 HSBP1O75506 76 aa10.36□□□□□ -0.75
COPS3-210ENST00000492672 SLPIP03973 132 aa10.36□□□□□ -0.75
COPS3-210ENST00000492672 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
COPS3-210ENST00000492672 Q6ZN92 141 aa10.36□□□□□ -0.75
COPS3-210ENST00000492672 IGHV3OR16-9A0A0B4J2B5 98 aa10.35□□□□□ -0.75
COPS3-210ENST00000492672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
COPS3-210ENST00000492672 NPSP0C0P6 89 aa10.35□□□□□ -0.75
COPS3-210ENST00000492672 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
COPS3-210ENST00000492672 NDUFA6P56556 154 aa10.34□□□□□ -0.75
COPS3-210ENST00000492672 C2orf88Q9BSF0 95 aa10.34□□□□□ -0.75
COPS3-210ENST00000492672 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 C16orf90A8MZG2 172 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 COX7A2LO14548 114 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 PMVKQ15126 192 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 LRP1BQ9NZR2 4599 aa10.33□□□□□ -0.76
COPS3-210ENST00000492672 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
COPS3-210ENST00000492672 LINC01549A6NIU2 74 aa10.32□□□□□ -0.76
COPS3-210ENST00000492672 FABP4P15090 132 aa10.32□□□□□ -0.76
COPS3-210ENST00000492672 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
COPS3-210ENST00000492672 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
COPS3-210ENST00000492672 BIRC6Q9NR09 4857 aa10.3□□□□□ -0.76
COPS3-210ENST00000492672 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
COPS3-210ENST00000492672 ATP5LO75964 103 aa10.3□□□□□ -0.76
COPS3-210ENST00000492672 MALP21145 153 aa10.3□□□□□ -0.76
COPS3-210ENST00000492672 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
COPS3-210ENST00000492672 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
COPS3-210ENST00000492672 A0A087WZ39 114 aa10.29□□□□□ -0.76
COPS3-210ENST00000492672 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
COPS3-210ENST00000492672 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
COPS3-210ENST00000492672 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
COPS3-210ENST00000492672 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
COPS3-210ENST00000492672 LEPROTL1O95214 131 aa10.28□□□□□ -0.76
COPS3-210ENST00000492672 CFAP161Q6P656 301 aa10.28□□□□□ -0.76
COPS3-210ENST00000492672 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
COPS3-210ENST00000492672 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
COPS3-210ENST00000492672 GCSHP23434 173 aa10.27□□□□□ -0.77
COPS3-210ENST00000492672 COA6Q5JTJ3 125 aaKnown RBP10.27□□□□□ -0.77
COPS3-210ENST00000492672 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.77
COPS3-210ENST00000492672 H0Y8G0 127 aa10.26□□□□□ -0.77
COPS3-210ENST00000492672 HERVK_113P63121 156 aa10.26□□□□□ -0.77
COPS3-210ENST00000492672 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
COPS3-210ENST00000492672 GEMIN7Q9H840 131 aaKnown RBP10.26□□□□□ -0.77
COPS3-210ENST00000492672 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
COPS3-210ENST00000492672 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
COPS3-210ENST00000492672 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
COPS3-210ENST00000492672 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
COPS3-210ENST00000492672 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
COPS3-210ENST00000492672 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
COPS3-210ENST00000492672 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
COPS3-210ENST00000492672 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
COPS3-210ENST00000492672 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
COPS3-210ENST00000492672 HAMPP81172 84 aa10.24□□□□□ -0.77
COPS3-210ENST00000492672 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
COPS3-210ENST00000492672 C9orf163Q8N9P6 203 aa10.24□□□□□ -0.77
COPS3-210ENST00000492672 CHAC1Q9BUX1 264 aa10.24□□□□□ -0.77
COPS3-210ENST00000492672 MRPL35Q9NZE8 188 aaKnown RBP10.24□□□□□ -0.77
COPS3-210ENST00000492672 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
COPS3-210ENST00000492672 ZNF22P17026 224 aaPredicted RBP10.23□□□□□ -0.77
COPS3-210ENST00000492672 C10orf25Q5T742 122 aa10.23□□□□□ -0.77
COPS3-210ENST00000492672 APOBP04114 4563 aaKnown RBP10.22□□□□□ -0.77
COPS3-210ENST00000492672 TRAV12-1A0A0B4J245 112 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 SMIM1B2RUZ4 78 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 APOMO95445 188 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 SEC11AP67812 179 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 ODF1Q14990 250 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 Q6ZRU5 148 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
COPS3-210ENST00000492672 PANO1I0J062 215 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 UNQ6190/PRO20217Q6UXQ8 127 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 OR10D4PQ8NGN7 298 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 HSPB8Q9UJY1 196 aa10.21□□□□□ -0.77
COPS3-210ENST00000492672 SYCNQ0VAF6 134 aa10.2□□□□□ -0.78
COPS3-210ENST00000492672 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
COPS3-210ENST00000492672 F8VRH5 84 aa10.19□□□□□ -0.78
COPS3-210ENST00000492672 XGP55808 180 aa10.19□□□□□ -0.78
COPS3-210ENST00000492672 C2orf48Q96LS8 159 aa10.19□□□□□ -0.78
COPS3-210ENST00000492672 CARD19Q96LW7 228 aa10.19□□□□□ -0.78
COPS3-210ENST00000492672 CAMK2N2Q96S95 79 aa10.19□□□□□ -0.78
COPS3-210ENST00000492672 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
COPS3-210ENST00000492672 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
COPS3-210ENST00000492672 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
COPS3-210ENST00000492672 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
COPS3-210ENST00000492672 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
COPS3-210ENST00000492672 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
COPS3-210ENST00000492672 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
COPS3-210ENST00000492672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.17□□□□□ -0.78
COPS3-210ENST00000492672 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
COPS3-210ENST00000492672 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms