RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
SS18L1-205ENST00000492466 PKHD1L1Q86WI1 4243 aa9.5□□□□□ -0.89
SS18L1-205ENST00000492466 IGHV3-64A0A075B6Q5 118 aa9.49□□□□□ -0.89
SS18L1-205ENST00000492466 ZNF561-AS1K7EIQ3 104 aa9.49□□□□□ -0.89
SS18L1-205ENST00000492466 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
SS18L1-205ENST00000492466 SCXQ7RTU7 201 aa9.49□□□□□ -0.89
SS18L1-205ENST00000492466 IGLV4-3A0A075B6K6 122 aa9.48□□□□□ -0.89
SS18L1-205ENST00000492466 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
SS18L1-205ENST00000492466 KRTAP29-1A8MX34 341 aaPredicted RBP9.48□□□□□ -0.89
SS18L1-205ENST00000492466 APOMO95445 188 aa9.48□□□□□ -0.89
SS18L1-205ENST00000492466 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
SS18L1-205ENST00000492466 C5orf38Q86SI9 138 aa9.48□□□□□ -0.89
SS18L1-205ENST00000492466 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
SS18L1-205ENST00000492466 ALKBH7Q9BT30 221 aaPredicted RBP9.48□□□□□ -0.89
SS18L1-205ENST00000492466 PYGO1Q9Y3Y4 419 aa9.48□□□□□ -0.89
SS18L1-205ENST00000492466 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
SS18L1-205ENST00000492466 SLC7A5P1Q8MH63 180 aa9.47□□□□□ -0.89
SS18L1-205ENST00000492466 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.89
SS18L1-205ENST00000492466 J3QL48 77 aa9.46□□□□□ -0.9
SS18L1-205ENST00000492466 CHAC1Q9BUX1 264 aa9.46□□□□□ -0.9
SS18L1-205ENST00000492466 VCX2Q9H322 139 aa9.46□□□□□ -0.9
SS18L1-205ENST00000492466 CBLN2Q8IUK8 224 aa9.45□□□□□ -0.9
SS18L1-205ENST00000492466 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
SS18L1-205ENST00000492466 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
SS18L1-205ENST00000492466 DPH3Q96FX2 82 aa9.45□□□□□ -0.9
SS18L1-205ENST00000492466 CARD19Q96LW7 228 aa9.45□□□□□ -0.9
SS18L1-205ENST00000492466 PKIGQ9Y2B9 76 aa9.45□□□□□ -0.9
SS18L1-205ENST00000492466 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
SS18L1-205ENST00000492466 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
SS18L1-205ENST00000492466 SCGB3A1Q96QR1 104 aa9.44□□□□□ -0.9
SS18L1-205ENST00000492466 LINC01549A6NIU2 74 aa9.43□□□□□ -0.9
SS18L1-205ENST00000492466 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
SS18L1-205ENST00000492466 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
SS18L1-205ENST00000492466 NPSP0C0P6 89 aa9.42□□□□□ -0.9
SS18L1-205ENST00000492466 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
SS18L1-205ENST00000492466 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
SS18L1-205ENST00000492466 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
SS18L1-205ENST00000492466 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
SS18L1-205ENST00000492466 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
SS18L1-205ENST00000492466 SLPIP03973 132 aa9.41□□□□□ -0.9
SS18L1-205ENST00000492466 OR10D4PQ8NGN7 298 aa9.41□□□□□ -0.9
SS18L1-205ENST00000492466 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
SS18L1-205ENST00000492466 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
SS18L1-205ENST00000492466 UBE2D1P51668 147 aa9.4□□□□□ -0.9
SS18L1-205ENST00000492466 RAB5BP61020 215 aa9.4□□□□□ -0.9
SS18L1-205ENST00000492466 COX6A2Q02221 97 aa9.4□□□□□ -0.9
SS18L1-205ENST00000492466 SDIM1Q6ZPB5 146 aa9.4□□□□□ -0.9
SS18L1-205ENST00000492466 ERASQ7Z444 233 aa9.4□□□□□ -0.9
SS18L1-205ENST00000492466 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
SS18L1-205ENST00000492466 IGHV3OR16-9A0A0B4J2B5 98 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 CHTF8P0CG12 524 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 SEC11AP67812 179 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 AMELXQ99217 191 aa9.39□□□□□ -0.91
SS18L1-205ENST00000492466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
SS18L1-205ENST00000492466 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
SS18L1-205ENST00000492466 PACRGQ96M98 296 aaPredicted RBP9.38□□□□□ -0.91
SS18L1-205ENST00000492466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
SS18L1-205ENST00000492466 NDUFA1O15239 70 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 HBDP02042 147 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 PRSS2P07478 247 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 LINC00614P0C842 121 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 NDUFA6P56556 154 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 HERVK_113P63121 156 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 Q6ZRU5 148 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
SS18L1-205ENST00000492466 A0A087WZ39 114 aa9.36□□□□□ -0.91
SS18L1-205ENST00000492466 LINC01546A6NGU7 62 aa9.36□□□□□ -0.91
SS18L1-205ENST00000492466 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
SS18L1-205ENST00000492466 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
SS18L1-205ENST00000492466 YPEL4Q96NS1 127 aa9.36□□□□□ -0.91
SS18L1-205ENST00000492466 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
SS18L1-205ENST00000492466 LOC107984640A0A0U1RRK4 108 aa9.35□□□□□ -0.91
SS18L1-205ENST00000492466 PANO1I0J062 215 aa9.35□□□□□ -0.91
SS18L1-205ENST00000492466 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
SS18L1-205ENST00000492466 SPACA4Q8TDM5 124 aa9.35□□□□□ -0.91
SS18L1-205ENST00000492466 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
SS18L1-205ENST00000492466 A0A096LNI7 61 aa9.34□□□□□ -0.91
SS18L1-205ENST00000492466 OXTP01178 125 aa9.34□□□□□ -0.91
SS18L1-205ENST00000492466 HNRNPA3P51991 378 aaKnown RBP9.34□□□□□ -0.91
SS18L1-205ENST00000492466 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
SS18L1-205ENST00000492466 PMVKQ15126 192 aa9.34□□□□□ -0.91
SS18L1-205ENST00000492466 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
SS18L1-205ENST00000492466 A0A087WYN8 130 aa9.33□□□□□ -0.92
SS18L1-205ENST00000492466 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
SS18L1-205ENST00000492466 F8WDY8 70 aa9.33□□□□□ -0.92
SS18L1-205ENST00000492466 ATP5LO75964 103 aa9.32□□□□□ -0.92
SS18L1-205ENST00000492466 CKS1BP61024 79 aa9.32□□□□□ -0.92
SS18L1-205ENST00000492466 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
SS18L1-205ENST00000492466 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
SS18L1-205ENST00000492466 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
SS18L1-205ENST00000492466 STPG4Q8N801 248 aa9.32□□□□□ -0.92
SS18L1-205ENST00000492466 HSBP1O75506 76 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 TRGC2P03986 189 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
SS18L1-205ENST00000492466 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms