RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CST9LP1Q5W188 147 aa8.2□□□□□ -1.1
USF1-206ENST00000491629 MLST8Q9BVC4 326 aa8.2□□□□□ -1.1
USF1-206ENST00000491629 MT-ND6P03923 174 aa8.19□□□□□ -1.1
USF1-206ENST00000491629 LINC00310P59036 64 aa8.19□□□□□ -1.1
USF1-206ENST00000491629 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
USF1-206ENST00000491629 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
USF1-206ENST00000491629 SPANXN1Q5VSR9 72 aa8.18□□□□□ -1.1
USF1-206ENST00000491629 MTURNQ8N3F0 131 aa8.18□□□□□ -1.1
USF1-206ENST00000491629 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
USF1-206ENST00000491629 TAX1BP3O14907 124 aa8.17□□□□□ -1.1
USF1-206ENST00000491629 SERF1AO75920 110 aa8.17□□□□□ -1.1
USF1-206ENST00000491629 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
USF1-206ENST00000491629 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
USF1-206ENST00000491629 TMEM243Q9BU79 118 aa8.17□□□□□ -1.1
USF1-206ENST00000491629 PDE6DO43924 150 aa8.16□□□□□ -1.1
USF1-206ENST00000491629 HINT1P49773 126 aaPredicted RBP8.16□□□□□ -1.1
USF1-206ENST00000491629 MRPL54Q6P161 138 aaKnown RBP8.16□□□□□ -1.1
USF1-206ENST00000491629 GNB1LQ9BYB4 327 aa8.16□□□□□ -1.1
USF1-206ENST00000491629 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 PAGE4O60829 102 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 BAGE3Q86Y29 109 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 BAGE2Q86Y30 109 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 AP1S3Q96PC3 154 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 ST20Q9HBF5 79 aa8.15□□□□□ -1.1
USF1-206ENST00000491629 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
USF1-206ENST00000491629 MGPP08493 103 aa8.14□□□□□ -1.11
USF1-206ENST00000491629 IGLC6P0CF74 106 aa8.14□□□□□ -1.11
USF1-206ENST00000491629 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
USF1-206ENST00000491629 PGLYRP4Q96LB8 373 aa8.14□□□□□ -1.11
USF1-206ENST00000491629 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
USF1-206ENST00000491629 IGKV3OR2-268A0A0C4DH90 116 aa8.13□□□□□ -1.11
USF1-206ENST00000491629 KRTDAPP60985 99 aa8.13□□□□□ -1.11
USF1-206ENST00000491629 CHCHD10Q8WYQ3 142 aaPredicted RBP8.13□□□□□ -1.11
USF1-206ENST00000491629 LINC00526Q96FQ7 95 aa8.13□□□□□ -1.11
USF1-206ENST00000491629 PMCHL2Q9BQD1 86 aa8.13□□□□□ -1.11
USF1-206ENST00000491629 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
USF1-206ENST00000491629 BVES-AS1Q5T3Y7 98 aa8.12□□□□□ -1.11
USF1-206ENST00000491629 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
USF1-206ENST00000491629 FOXI1Q12951 378 aa8.11□□□□□ -1.11
USF1-206ENST00000491629 Q6ZRP5 223 aa8.11□□□□□ -1.11
USF1-206ENST00000491629 BORCS7Q96B45 105 aa8.11□□□□□ -1.11
USF1-206ENST00000491629 H7C1H1 209 aa8.1□□□□□ -1.11
USF1-206ENST00000491629 AMTP48728 403 aa8.1□□□□□ -1.11
USF1-206ENST00000491629 SEC11AP67812 179 aa8.1□□□□□ -1.11
USF1-206ENST00000491629 AMMECR1LQ6DCA0 310 aa8.1□□□□□ -1.11
USF1-206ENST00000491629 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
USF1-206ENST00000491629 UBE2L6O14933 153 aa8.09□□□□□ -1.11
USF1-206ENST00000491629 SIGMAR1Q99720 223 aa8.09□□□□□ -1.11
USF1-206ENST00000491629 TPPP3Q9BW30 176 aa8.09□□□□□ -1.11
USF1-206ENST00000491629 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 H3BRM9 83 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 NTF3P20783 257 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 Q6ZVH6 145 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 LINC00474Q9P2X8 69 aa8.07□□□□□ -1.12
USF1-206ENST00000491629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.06□□□□□ -1.12
USF1-206ENST00000491629 IGKV2-29A2NJV5 120 aaPredicted RBP8.06□□□□□ -1.12
USF1-206ENST00000491629 K7EP34 96 aa8.06□□□□□ -1.12
USF1-206ENST00000491629 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
USF1-206ENST00000491629 GATD1Q8NB37 220 aa8.06□□□□□ -1.12
USF1-206ENST00000491629 TSKUQ8WUA8 353 aa8.06□□□□□ -1.12
USF1-206ENST00000491629 TRAV26-2A0A0B4J265 109 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 C9orf118A6NHY6 69 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 CACNG7P62955 275 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 LYZL1Q6UWQ5 148 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 PRR26Q8N8Z3 221 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 C11orf52Q96A22 123 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 PSORS1C2Q9UIG4 136 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 FAT4Q6V0I7 4981 aa8.05□□□□□ -1.12
USF1-206ENST00000491629 A6NDN8 102 aa8.04□□□□□ -1.12
USF1-206ENST00000491629 J3QR89 54 aa8.04□□□□□ -1.12
USF1-206ENST00000491629 FGF6P10767 208 aa8.04□□□□□ -1.12
USF1-206ENST00000491629 XCL1P47992 114 aa8.04□□□□□ -1.12
USF1-206ENST00000491629 C18orf32Q8TCD1 76 aa8.04□□□□□ -1.12
USF1-206ENST00000491629 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
USF1-206ENST00000491629 OSTCQ9NRP0 149 aa8.04□□□□□ -1.12
USF1-206ENST00000491629 LINC00959A0A1B0GUT2 108 aa8.03□□□□□ -1.12
USF1-206ENST00000491629 FAM231BA6NCW3 169 aa8.03□□□□□ -1.12
USF1-206ENST00000491629 H0Y8G0 127 aa8.03□□□□□ -1.12
USF1-206ENST00000491629 HSD52Q0P140 79 aa8.03□□□□□ -1.12
USF1-206ENST00000491629 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
USF1-206ENST00000491629 IGHV1-58A0A0C4DH39 117 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 F2Z2F3 143 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 PMCHP20382 165 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 CKS1BP61024 79 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 GAGE2BQ13066 116 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 CENPWQ5EE01 88 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 MRAP2Q96G30 205 aa8.02□□□□□ -1.13
USF1-206ENST00000491629 TRBV20OR9-2A0A075B6H5 130 aa8.01□□□□□ -1.13
USF1-206ENST00000491629 TSPAN13O95857 204 aa8.01□□□□□ -1.13
USF1-206ENST00000491629 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
USF1-206ENST00000491629 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
USF1-206ENST00000491629 TMEM191AQ9H0A3 160 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms