RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
SUPT20H-220ENST00000490716 NXT2Q9NPJ8 142 aaKnown RBP5.75□□□□□ -1.49
SUPT20H-220ENST00000490716 C1orf196B1AJZ1 125 aa5.74□□□□□ -1.49
SUPT20H-220ENST00000490716 COX19Q49B96 90 aa5.74□□□□□ -1.49
SUPT20H-220ENST00000490716 MT-ND6P03923 174 aa5.74□□□□□ -1.49
SUPT20H-220ENST00000490716 LINC00528Q8N1L1 170 aa5.74□□□□□ -1.49
SUPT20H-220ENST00000490716 PRSS3P2Q8NHM4 247 aa5.74□□□□□ -1.49
SUPT20H-220ENST00000490716 C18orf32Q8TCD1 76 aa5.74□□□□□ -1.49
SUPT20H-220ENST00000490716 A0A096LNI7 61 aa5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 RNASE13Q5GAN3 156 aaKnown RBP5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 TMEM141Q96I45 108 aa5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 MAP1LC3AQ9H492 121 aa5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 TMEM101Q96IK0 257 aa5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 SRSF9Q13242 221 aaKnown RBP eCLIP5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 MRPL35Q9NZE8 188 aaKnown RBP5.73□□□□□ -1.49
SUPT20H-220ENST00000490716 RNASEKQ6P5S7 137 aaKnown RBP5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 Q6ZRU5 148 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 XCL1P47992 114 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 ZC2HC1BQ5TFG8 222 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 MRPL18Q9H0U6 180 aaKnown RBP5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 IGLV4-69A0A075B6H9 119 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 FCER1GP30273 86 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 SS18Q15532 418 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 C10orf25Q5T742 122 aa5.72□□□□□ -1.49
SUPT20H-220ENST00000490716 hDV102S1A0JD36 115 aa5.71□□□□□ -1.49
SUPT20H-220ENST00000490716 CFAP161Q6P656 301 aa5.71□□□□□ -1.49
SUPT20H-220ENST00000490716 KRTAP11-1Q8IUC1 163 aa5.71□□□□□ -1.49
SUPT20H-220ENST00000490716 TMEM18Q96B42 140 aa5.71□□□□□ -1.49
SUPT20H-220ENST00000490716 KIAA1644Q3SXP7 199 aa5.71□□□□□ -1.5
SUPT20H-220ENST00000490716 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
SUPT20H-220ENST00000490716 SVBPQ8N300 66 aa5.71□□□□□ -1.5
SUPT20H-220ENST00000490716 ERASQ7Z444 233 aa5.71□□□□□ -1.5
SUPT20H-220ENST00000490716 C6orf48Q9UBA6 75 aa5.71□□□□□ -1.5
SUPT20H-220ENST00000490716 A0A087WYN8 130 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 COLCA2A8K830 154 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 SMAGPQ0VAQ4 97 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 HIGD2BQ4VC39 106 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 COX7A2LO14548 114 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 SNAPINO95295 136 aa5.7□□□□□ -1.5
SUPT20H-220ENST00000490716 TINCRA0A1B0GVN0 87 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 IGLC3P0DOY3 106 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 A0A1W2PNN7 141 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 CST9LQ9H4G1 147 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 CYSLTR1Q9Y271 337 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 LOC389332A0A1B0GUA5 103 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 Q6ZRP5 223 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 RPS10P5Q9NQ39 176 aa5.69□□□□□ -1.5
SUPT20H-220ENST00000490716 SMIM1B2RUZ4 78 aa5.68□□□□□ -1.5
SUPT20H-220ENST00000490716 SLC7A5P1Q8MH63 180 aa5.68□□□□□ -1.5
SUPT20H-220ENST00000490716 LINC00526Q96FQ7 95 aa5.68□□□□□ -1.5
SUPT20H-220ENST00000490716 LINC01549A6NIU2 74 aa5.68□□□□□ -1.5
SUPT20H-220ENST00000490716 PRR3P79522 188 aaKnown RBP5.68□□□□□ -1.5
SUPT20H-220ENST00000490716 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
SUPT20H-220ENST00000490716 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
SUPT20H-220ENST00000490716 Q8IZM0 81 aa5.67□□□□□ -1.5
SUPT20H-220ENST00000490716 C9orf129Q5T035 196 aaKnown RBP5.67□□□□□ -1.5
SUPT20H-220ENST00000490716 TRAV13-1A0A0B4J241 112 aa5.67□□□□□ -1.5
SUPT20H-220ENST00000490716 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 CBLN2Q8IUK8 224 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 APOMO95445 188 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 C5orf38Q86SI9 138 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 CDKN2A-AS1Q9UH64 79 aa5.66□□□□□ -1.5
SUPT20H-220ENST00000490716 OXTP01178 125 aa5.65□□□□□ -1.5
SUPT20H-220ENST00000490716 APOC3P02656 99 aa5.65□□□□□ -1.5
SUPT20H-220ENST00000490716 LINC00614P0C842 121 aa5.65□□□□□ -1.5
SUPT20H-220ENST00000490716 IFITM10A6NMD0 228 aa5.65□□□□□ -1.5
SUPT20H-220ENST00000490716 S100PP25815 95 aa5.65□□□□□ -1.5
SUPT20H-220ENST00000490716 UNQ6190/PRO20217Q6UXQ8 127 aa5.65□□□□□ -1.5
SUPT20H-220ENST00000490716 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.65□□□□□ -1.51
SUPT20H-220ENST00000490716 LOC107984640A0A0U1RRK4 108 aa5.65□□□□□ -1.51
SUPT20H-220ENST00000490716 FABP9Q0Z7S8 132 aa5.65□□□□□ -1.51
SUPT20H-220ENST00000490716 LINC00474Q9P2X8 69 aa5.65□□□□□ -1.51
SUPT20H-220ENST00000490716 PLA2G2DQ9UNK4 145 aa5.65□□□□□ -1.51
SUPT20H-220ENST00000490716 IGLV5-37A0A075B6J1 123 aa5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 IGKV3OR2-268A0A0C4DH90 116 aa5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 RAB5AP20339 215 aa5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 G0S2P27469 103 aa5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
SUPT20H-220ENST00000490716 TRAV12-1A0A0B4J245 112 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 HERVK_113P63121 156 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 NUPR1O60356 82 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 RPL37AP61513 92 aaKnown RBP5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 PMVKQ15126 192 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 ORAOV1Q8WV07 137 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
SUPT20H-220ENST00000490716 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
SUPT20H-220ENST00000490716 ZNF625Q96I27 306 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms