RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 USP17L23D6RBM5 183 aa13.12□□□□□ -0.31
SHROOM3-209ENST00000490690 LINC00310P59036 64 aa13.12□□□□□ -0.31
SHROOM3-209ENST00000490690 LINC00242Q5T6M2 205 aa13.12□□□□□ -0.31
SHROOM3-209ENST00000490690 LINC01561Q8N1V8 128 aa13.12□□□□□ -0.31
SHROOM3-209ENST00000490690 MAPKAPK5-AS1Q8N8E1 139 aa13.12□□□□□ -0.31
SHROOM3-209ENST00000490690 TRAV12-1A0A0B4J245 112 aa13.11□□□□□ -0.31
SHROOM3-209ENST00000490690 S100A6P06703 90 aa13.11□□□□□ -0.31
SHROOM3-209ENST00000490690 NDUFA6P56556 154 aa13.11□□□□□ -0.31
SHROOM3-209ENST00000490690 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
SHROOM3-209ENST00000490690 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
SHROOM3-209ENST00000490690 DNAH10Q8IVF4 4471 aa13.1□□□□□ -0.31
SHROOM3-209ENST00000490690 DNAH17Q9UFH2 4485 aa13.08□□□□□ -0.32
SHROOM3-209ENST00000490690 A0A087WZ39 114 aa13.08□□□□□ -0.32
SHROOM3-209ENST00000490690 FRAS1Q86XX4 4008 aa13.08□□□□□ -0.32
SHROOM3-209ENST00000490690 A0A1B0GVY2 172 aa13.07□□□□□ -0.32
SHROOM3-209ENST00000490690 H3BRM9 83 aa13.07□□□□□ -0.32
SHROOM3-209ENST00000490690 LECT2O14960 151 aa13.07□□□□□ -0.32
SHROOM3-209ENST00000490690 OR10D4PQ8NGN7 298 aa13.07□□□□□ -0.32
SHROOM3-209ENST00000490690 MAP1LC3CQ9BXW4 147 aa13.07□□□□□ -0.32
SHROOM3-209ENST00000490690 GVQW2A0A096LPI5 108 aaPredicted RBP13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 hDV102S1A0JD36 115 aa13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 ZNF561-AS1K7EIQ3 104 aa13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 NUPR1O60356 82 aa13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
SHROOM3-209ENST00000490690 F8WDY8 70 aa13.05□□□□□ -0.32
SHROOM3-209ENST00000490690 IGLC3P0DOY3 106 aa13.05□□□□□ -0.32
SHROOM3-209ENST00000490690 FABP4P15090 132 aa13.05□□□□□ -0.32
SHROOM3-209ENST00000490690 ZC2HC1BQ5TFG8 222 aa13.05□□□□□ -0.32
SHROOM3-209ENST00000490690 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
SHROOM3-209ENST00000490690 IGLV5-52A0A0A0MRZ9 124 aa13.04□□□□□ -0.32
SHROOM3-209ENST00000490690 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
SHROOM3-209ENST00000490690 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
SHROOM3-209ENST00000490690 PKIGQ9Y2B9 76 aa13.04□□□□□ -0.32
SHROOM3-209ENST00000490690 IGLV5-45A0A087WSX0 123 aa13.03□□□□□ -0.32
SHROOM3-209ENST00000490690 F8VRH5 84 aa13.03□□□□□ -0.32
SHROOM3-209ENST00000490690 S100A2P29034 98 aa13.03□□□□□ -0.32
SHROOM3-209ENST00000490690 WFDC2Q14508 124 aa13.03□□□□□ -0.32
SHROOM3-209ENST00000490690 C15orf56Q8N910 161 aa13.03□□□□□ -0.32
SHROOM3-209ENST00000490690 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
SHROOM3-209ENST00000490690 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.32
SHROOM3-209ENST00000490690 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.33
SHROOM3-209ENST00000490690 CNBPP62633 177 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-209ENST00000490690 COX6A2Q02221 97 aa13.01□□□□□ -0.33
SHROOM3-209ENST00000490690 IGLV2-33A0A075B6J2 118 aaPredicted RBP13□□□□□ -0.33
SHROOM3-209ENST00000490690 PLNP26678 52 aa13□□□□□ -0.33
SHROOM3-209ENST00000490690 AKR1D1P51857 326 aa13□□□□□ -0.33
SHROOM3-209ENST00000490690 ORAOV1Q8WV07 137 aa13□□□□□ -0.33
SHROOM3-209ENST00000490690 C2orf48Q96LS8 159 aa13□□□□□ -0.33
SHROOM3-209ENST00000490690 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
SHROOM3-209ENST00000490690 PRSS2P07478 247 aa12.99□□□□□ -0.33
SHROOM3-209ENST00000490690 SPAG11BQ08648 103 aa12.99□□□□□ -0.33
SHROOM3-209ENST00000490690 IGLV4-69A0A075B6H9 119 aa12.98□□□□□ -0.33
SHROOM3-209ENST00000490690 C16orf90A8MZG2 172 aa12.98□□□□□ -0.33
SHROOM3-209ENST00000490690 HIGD2BQ4VC39 106 aa12.98□□□□□ -0.33
SHROOM3-209ENST00000490690 H0Y8G0 127 aa12.97□□□□□ -0.33
SHROOM3-209ENST00000490690 KRTAP10-2P60368 255 aa12.97□□□□□ -0.33
SHROOM3-209ENST00000490690 ODF1Q14990 250 aa12.97□□□□□ -0.33
SHROOM3-209ENST00000490690 PET117Q6UWS5 81 aa12.97□□□□□ -0.33
SHROOM3-209ENST00000490690 MRPL35Q9NZE8 188 aaKnown RBP12.97□□□□□ -0.33
SHROOM3-209ENST00000490690 C20orf202A1L168 122 aa12.96□□□□□ -0.33
SHROOM3-209ENST00000490690 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.33
SHROOM3-209ENST00000490690 GCSHP23434 173 aa12.96□□□□□ -0.33
SHROOM3-209ENST00000490690 CXCL5P42830 114 aa12.96□□□□□ -0.33
SHROOM3-209ENST00000490690 TMEM170BQ5T4T1 132 aa12.96□□□□□ -0.33
SHROOM3-209ENST00000490690 Q8IZM0 81 aa12.96□□□□□ -0.33
SHROOM3-209ENST00000490690 CAMK2N2Q96S95 79 aa12.95□□□□□ -0.34
SHROOM3-209ENST00000490690 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 NDUFA1O15239 70 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 DPM2O94777 84 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 ZNF22P17026 224 aaPredicted RBP12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 HIST3H2BBQ8N257 126 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 CARD19Q96LW7 228 aa12.94□□□□□ -0.34
SHROOM3-209ENST00000490690 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
SHROOM3-209ENST00000490690 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
SHROOM3-209ENST00000490690 C9orf163Q8N9P6 203 aa12.93□□□□□ -0.34
SHROOM3-209ENST00000490690 CKS1BP61024 79 aa12.92□□□□□ -0.34
SHROOM3-209ENST00000490690 HECTD4Q9Y4D8 3996 aa12.91□□□□□ -0.34
SHROOM3-209ENST00000490690 IGKCP01834 107 aa12.91□□□□□ -0.34
SHROOM3-209ENST00000490690 HERVK_113P61574 105 aa12.91□□□□□ -0.34
SHROOM3-209ENST00000490690 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
SHROOM3-209ENST00000490690 TOMM7Q9P0U1 55 aa12.91□□□□□ -0.34
SHROOM3-209ENST00000490690 C5orf52A6NGY3 159 aa12.9□□□□□ -0.34
SHROOM3-209ENST00000490690 KRTDAPP60985 99 aa12.9□□□□□ -0.34
SHROOM3-209ENST00000490690 SNRPEP62304 92 aaKnown RBP12.9□□□□□ -0.34
SHROOM3-209ENST00000490690 LINC01545Q5VT33 79 aa12.9□□□□□ -0.34
SHROOM3-209ENST00000490690 COX7B2Q8TF08 81 aa12.9□□□□□ -0.34
SHROOM3-209ENST00000490690 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
SHROOM3-209ENST00000490690 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
SHROOM3-209ENST00000490690 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
SHROOM3-209ENST00000490690 HIST1H2BLQ99880 126 aa12.89□□□□□ -0.35
SHROOM3-209ENST00000490690 IGLV5-39A0A0G2JS06 123 aa12.88□□□□□ -0.35
SHROOM3-209ENST00000490690 KIAA0087Q14695 138 aa12.88□□□□□ -0.35
SHROOM3-209ENST00000490690 TMEM223A0PJW6 202 aa12.87□□□□□ -0.35
SHROOM3-209ENST00000490690 PKD1P98161 4303 aa12.86□□□□□ -0.35
SHROOM3-209ENST00000490690 SLPIP03973 132 aa12.85□□□□□ -0.35
SHROOM3-209ENST00000490690 Q6ZRU5 148 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms