RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 HIST1H4GQ99525 98 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 EDA2RQ9HAV5 297 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
CSTF1-205ENST00000490539 TRAV10A0A0B4J240 114 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 TRAV26-2A0A0B4J265 109 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 TRAV21A0A0B4J279 112 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 TRBV7-9A0A0J9YWB2 115 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 H3BVH4 76 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 CIDEAO60543 219 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 CFC1BP0CG36 223 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 CFC1P0CG37 223 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 ASIPP42127 132 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 DAD1P61803 113 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 CEMP1Q6PRD7 247 aaPredicted RBP3.33□□□□□ -1.88
CSTF1-205ENST00000490539 CD164L2Q6UWJ8 174 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 ZFAND2AQ8N6M9 145 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 POM121L12Q8N7R1 296 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 RASL10AQ92737 203 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 C16orf74Q96GX8 76 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 SIGMAR1Q99720 223 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 DPH3P1Q9H4G8 78 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 PRO0461Q9UI25 63 aa3.33□□□□□ -1.88
CSTF1-205ENST00000490539 TRAV12-2A0A075B6T6 113 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 TRAV12-3A0A0B4J271 114 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 F8WDY8 70 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 DEFB4AO15263 64 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 NXPH4O95158 308 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 AZU1P20160 251 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 RNASE4P34096 147 aaKnown RBP3.32□□□□□ -1.88
CSTF1-205ENST00000490539 DEFB1P60022 68 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 WFDC2Q14508 124 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 PRR9Q5T870 116 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 Q75L30 129 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 Q8NAQ8 132 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 CSNK1G2-AS1Q8NCQ2 148 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 TMEM263Q8WUH6 116 aaKnown RBP3.32□□□□□ -1.88
CSTF1-205ENST00000490539 BAALCQ8WXS3 180 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 FAM19A4Q96LR4 140 aa3.32□□□□□ -1.88
CSTF1-205ENST00000490539 DMBT1Q9UGM3 2413 aaPredicted RBP3.32□□□□□ -1.88
CSTF1-205ENST00000490539 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 HUWE1Q7Z6Z7 4374 aaKnown RBP3.31□□□□□ -1.88
CSTF1-205ENST00000490539 DEFB131BA0A096LNP1 70 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 A8MTW9 85 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 H3BMG7 143 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
CSTF1-205ENST00000490539 HTN3P15516 51 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 S100A4P26447 101 aaKnown RBP3.31□□□□□ -1.88
CSTF1-205ENST00000490539 UBE2D1P51668 147 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 HERVK_113P61574 105 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 FAM222AQ5U5X8 452 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 FAM159AQ6UWV7 190 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 AMTNQ6UX39 209 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 Q6ZQT7 251 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 RPL39LQ96EH5 51 aaKnown RBP3.31□□□□□ -1.88
CSTF1-205ENST00000490539 TMEM141Q96I45 108 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 PRADC1Q9BSG0 188 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 PHLDA3Q9Y5J5 127 aa3.31□□□□□ -1.88
CSTF1-205ENST00000490539 TRGV2A0A075B6R0 118 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 A0A1B0GV72 72 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 ZNF815PA8K554 130 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 ATP5G1P05496 136 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 MGPP08493 103 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 RNASE3P12724 160 aaKnown RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 POLR2KP53803 58 aaKnown RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 ZNF415Q09FC8 603 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 RBMY1FQ15415 496 aaKnown RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 CFAP126Q5VTH2 177 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 SCGB1D4Q6XE38 83 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 SH2D6Q7Z4S9 175 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 C1orf158Q8N1D5 194 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 C14orf178Q8N769 122 aaPredicted RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 GTSF1LQ9H1H1 148 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 VCX2Q9H322 139 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 Q9H8V8 135 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 MRPL16Q9NX20 251 aaKnown RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 KIF25-AS1Q9Y6Z4 181 aa3.3□□□□□ -1.88
CSTF1-205ENST00000490539 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
CSTF1-205ENST00000490539 IGLV4-69A0A075B6H9 119 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 TRBV20-1A0A075B6N2 111 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 IGHV1OR15-1A0A075B7D0 117 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 TRBV6-5A0A0K0K1A5 114 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 IGIPA6NJ69 53 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 C11orf86A6NJI1 115 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 KLLNB2CW77 178 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 F5H768 121 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 M0QXV9 152 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 APOMO95445 188 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 TSPAN13O95857 204 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms