RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 LEAP2Q969E1 77 aa1.81□□□□□ -2.12
UBXN4-208ENST00000490163 NDUFA4L2Q9NRX3 87 aa1.81□□□□□ -2.12
UBXN4-208ENST00000490163 DMDP11532 3685 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 F5P12259 2224 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 DSCAMO60469 2012 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 LAMA3Q16787 3333 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 IGHV1-58A0A0C4DH39 117 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 A0A0J9YX75 114 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 A6NDX4 124 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 KRTAP10-9P60411 292 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 REG3AQ06141 175 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 PDE6HQ13956 83 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 MIAQ16674 131 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 C10orf55Q5SWW7 151 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 HCP5Q6MZN7 132 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 ZNF826PQ6ZT77 177 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 Q8N9W7 124 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 TYMSOSQ8TAI1 123 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 MRPL36Q9P0J6 103 aaKnown RBP1.8□□□□□ -2.12
UBXN4-208ENST00000490163 IGLV4-69A0A075B6H9 119 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 IGHV1-3A0A0C4DH29 117 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 BCE1O60756 84 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 IGHV1-46P01743 117 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 S100A4P26447 101 aaKnown RBP1.8□□□□□ -2.12
UBXN4-208ENST00000490163 RPL27AP46776 148 aaKnown RBP1.8□□□□□ -2.12
UBXN4-208ENST00000490163 BLCAPP62952 87 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 WT1-ASQ06250 92 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 TMEM167AQ8TBQ9 72 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 LINC00574Q9H8X3 128 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 SNURFQ9Y675 71 aa1.8□□□□□ -2.12
UBXN4-208ENST00000490163 A0A0J9YWU9 116 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 H3BRN7 92 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 M0R381 172 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 TFF1P04155 84 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 DYNLRB2Q8TF09 96 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 TIMM17AQ99595 171 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 RNF5Q99942 180 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 C14orf132Q9NPU4 83 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 LINC00846Q9NV44 126 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 NDUFA12Q9UI09 145 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 AHCTF1Q8WYP5 2266 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 TRAV13-2A0A0B4J235 113 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 TRAV21A0A0B4J279 112 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 A8MUU9 505 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 E7EUB6 86 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 IGKV1-16P04430 117 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 CCL4P13236 92 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 ZNF80P51504 273 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-208ENST00000490163 NDPQ00604 133 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 KLKP1Q107X0 134 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 ESRGQ1W209 222 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 RMI2Q96E14 147 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 AMELXQ99217 191 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 CCL13Q99616 98 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 UBL5Q9BZL1 73 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 UNC80Q8N2C7 3258 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 WNK2Q9Y3S1 2297 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 A0A0C4DFX4 3053 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 DNAJC13O75165 2243 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 RPL28P46779 137 aaKnown RBP1.79□□□□□ -2.12
UBXN4-208ENST00000490163 KRTAP10-7P60409 375 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-208ENST00000490163 Q8NDZ9 215 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 RPL39LQ96EH5 51 aaKnown RBP1.79□□□□□ -2.12
UBXN4-208ENST00000490163 PHLDA3Q9Y5J5 127 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 PTPRQQ9UMZ3 2332 aa1.79□□□□□ -2.12
UBXN4-208ENST00000490163 TRBV27A0A0K0K1C4 114 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 A0A1B0GU33 70 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 UBE2L6O14933 153 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 UBE2BP63146 152 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 LYPD5Q6UWN5 251 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 ENHOQ6UWT2 76 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 DEFB124Q8NES8 71 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 ZNRD1Q9P1U0 126 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 KMT2BQ9UMN6 2715 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-208ENST00000490163 IGIPA6NJ69 53 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 IGHV1-69P01742 117 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 APELAP0DMC3 54 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 CCL3P10147 92 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 MIFP14174 115 aa1.78□□□□□ -2.12
UBXN4-208ENST00000490163 FUSP35637 526 aaKnown RBP eCLIP1.78□□□□□ -2.12
UBXN4-208ENST00000490163 ZNF625Q96I27 306 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-208ENST00000490163 LAMA2P24043 3122 aaKnown RBP1.78□□□□□ -2.13
UBXN4-208ENST00000490163 IGKV2D-30A0A075B6S6 120 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 IGKV3D-15A0A087WSY6 115 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 TRBV10-3A0A0K0K1G6 114 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 CRPP02741 224 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 RPL39P62891 51 aaKnown RBP1.78□□□□□ -2.13
UBXN4-208ENST00000490163 BPESC1Q9GZL8 116 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 FAM215AQ9Y5M1 114 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.13
UBXN4-208ENST00000490163 MALRD1Q5VYJ5 2156 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 COL6A3P12111 3177 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 A8MUN3 132 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 INSP01308 110 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 WFDC9Q8NEX5 89 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 S4R3C0 116 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 WDFY3Q8IZQ1 3526 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 TPRP12270 2363 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms