RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TRAV12-1A0A0B4J245 112 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 GAGE12HA6NDE8 117 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 LCE2BO14633 110 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 EREGO14944 169 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 NDUFA6P56556 154 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 HSPB8Q9UJY1 196 aa8.23□□□□□ -1.09
HDAC1-210ENST00000490081 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
HDAC1-210ENST00000490081 A0A1B0GVY2 172 aa8.22□□□□□ -1.09
HDAC1-210ENST00000490081 XCL1P47992 114 aa8.22□□□□□ -1.09
HDAC1-210ENST00000490081 HERVK_113P63121 156 aa8.22□□□□□ -1.09
HDAC1-210ENST00000490081 PKD1P98161 4303 aa8.22□□□□□ -1.09
HDAC1-210ENST00000490081 A0A087WZ39 114 aa8.21□□□□□ -1.1
HDAC1-210ENST00000490081 COX7A2LO14548 114 aa8.21□□□□□ -1.1
HDAC1-210ENST00000490081 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
HDAC1-210ENST00000490081 DNAH11Q96DT5 4516 aa8.21□□□□□ -1.1
HDAC1-210ENST00000490081 IGLV5-45A0A087WSX0 123 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 IGHV1-58A0A0C4DH39 117 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 PRSS1P07477 247 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 SPATA12Q7Z6I5 190 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 Q8N814 137 aa8.2□□□□□ -1.1
HDAC1-210ENST00000490081 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
HDAC1-210ENST00000490081 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
HDAC1-210ENST00000490081 COX6A2Q02221 97 aa8.19□□□□□ -1.1
HDAC1-210ENST00000490081 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
HDAC1-210ENST00000490081 PCLOQ9Y6V0 5065 aa8.19□□□□□ -1.1
HDAC1-210ENST00000490081 KIAA1109Q2LD37 5005 aa8.18□□□□□ -1.1
HDAC1-210ENST00000490081 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
HDAC1-210ENST00000490081 A0A0J9YXV3 536 aa8.18□□□□□ -1.1
HDAC1-210ENST00000490081 APOMO95445 188 aa8.18□□□□□ -1.1
HDAC1-210ENST00000490081 WFDC2Q14508 124 aa8.18□□□□□ -1.1
HDAC1-210ENST00000490081 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
HDAC1-210ENST00000490081 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
HDAC1-210ENST00000490081 IGLV4-69A0A075B6H9 119 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 F8WDY8 70 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 S100A6P06703 90 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 FABP4P15090 132 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 OR10D4PQ8NGN7 298 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
HDAC1-210ENST00000490081 C5orf52A6NGY3 159 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 F8VRH5 84 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 MALP21145 153 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
HDAC1-210ENST00000490081 ODF1Q14990 250 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 C5orf38Q86SI9 138 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 HIST3H2BBQ8N257 126 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
HDAC1-210ENST00000490081 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
HDAC1-210ENST00000490081 C2orf48Q96LS8 159 aa8.15□□□□□ -1.1
HDAC1-210ENST00000490081 SYS1-DBNDD2H3BUS1 97 aa8.14□□□□□ -1.11
HDAC1-210ENST00000490081 LECT2O14960 151 aa8.14□□□□□ -1.11
HDAC1-210ENST00000490081 PET117Q6UWS5 81 aa8.14□□□□□ -1.11
HDAC1-210ENST00000490081 H3BRM9 83 aa8.13□□□□□ -1.11
HDAC1-210ENST00000490081 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
HDAC1-210ENST00000490081 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
HDAC1-210ENST00000490081 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
HDAC1-210ENST00000490081 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
HDAC1-210ENST00000490081 MRPL35Q9NZE8 188 aaKnown RBP8.13□□□□□ -1.11
HDAC1-210ENST00000490081 IGLV5-39A0A0G2JS06 123 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 hDV102S1A0JD36 115 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-210ENST00000490081 PLNP26678 52 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 S100A2P29034 98 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 AKR1D1P51857 326 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
HDAC1-210ENST00000490081 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 Q8IZM0 81 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 HIST1H2BLQ99880 126 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 PKHD1P08F94 4074 aa8.12□□□□□ -1.11
HDAC1-210ENST00000490081 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
HDAC1-210ENST00000490081 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
HDAC1-210ENST00000490081 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
HDAC1-210ENST00000490081 SLPIP03973 132 aa8.11□□□□□ -1.11
HDAC1-210ENST00000490081 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
HDAC1-210ENST00000490081 RNF151Q2KHN1 245 aa8.11□□□□□ -1.11
HDAC1-210ENST00000490081 ORAOV1Q8WV07 137 aa8.11□□□□□ -1.11
HDAC1-210ENST00000490081 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
HDAC1-210ENST00000490081 DPM2O94777 84 aa8.1□□□□□ -1.11
HDAC1-210ENST00000490081 DNAH5Q8TE73 4624 aa8.1□□□□□ -1.11
HDAC1-210ENST00000490081 SPAG11BQ08648 103 aa8.09□□□□□ -1.11
HDAC1-210ENST00000490081 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
HDAC1-210ENST00000490081 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.08□□□□□ -1.12
HDAC1-210ENST00000490081 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
HDAC1-210ENST00000490081 IGKCP01834 107 aa8.08□□□□□ -1.12
HDAC1-210ENST00000490081 GCSHP23434 173 aa8.08□□□□□ -1.12
HDAC1-210ENST00000490081 CXCL5P42830 114 aa8.08□□□□□ -1.12
HDAC1-210ENST00000490081 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
HDAC1-210ENST00000490081 TMEM170BQ5T4T1 132 aa8.08□□□□□ -1.12
HDAC1-210ENST00000490081 H0Y8G0 127 aa8.07□□□□□ -1.12
HDAC1-210ENST00000490081 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
HDAC1-210ENST00000490081 SFTA2Q6UW10 78 aa8.07□□□□□ -1.12
HDAC1-210ENST00000490081 PKIGQ9Y2B9 76 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms