RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
SRSF4-204ENST00000489898 HIST1H2BHQ93079 126 aa7.39□□□□□ -1.23
SRSF4-204ENST00000489898 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
SRSF4-204ENST00000489898 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
SRSF4-204ENST00000489898 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
SRSF4-204ENST00000489898 LPAP08519 4548 aa7.38□□□□□ -1.23
SRSF4-204ENST00000489898 AKR1D1P51857 326 aa7.38□□□□□ -1.23
SRSF4-204ENST00000489898 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
SRSF4-204ENST00000489898 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
SRSF4-204ENST00000489898 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
SRSF4-204ENST00000489898 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
SRSF4-204ENST00000489898 PMCHP20382 165 aa7.37□□□□□ -1.23
SRSF4-204ENST00000489898 SNRPEP62304 92 aaKnown RBP7.37□□□□□ -1.23
SRSF4-204ENST00000489898 CD164L2Q6UWJ8 174 aa7.37□□□□□ -1.23
SRSF4-204ENST00000489898 BAGE3Q86Y29 109 aa7.37□□□□□ -1.23
SRSF4-204ENST00000489898 ZNF664Q8N3J9 261 aa7.37□□□□□ -1.23
SRSF4-204ENST00000489898 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.36□□□□□ -1.23
SRSF4-204ENST00000489898 NPYP01303 97 aa7.36□□□□□ -1.23
SRSF4-204ENST00000489898 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
SRSF4-204ENST00000489898 AP5S1Q9NUS5 200 aa7.36□□□□□ -1.23
SRSF4-204ENST00000489898 IGHV1-58A0A0C4DH39 117 aa7.35□□□□□ -1.23
SRSF4-204ENST00000489898 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
SRSF4-204ENST00000489898 ODF1Q14990 250 aa7.35□□□□□ -1.23
SRSF4-204ENST00000489898 Q6ZRU5 148 aa7.35□□□□□ -1.23
SRSF4-204ENST00000489898 TIMM21Q9BVV7 248 aa7.35□□□□□ -1.23
SRSF4-204ENST00000489898 SMIM2Q9BVW6 85 aa7.35□□□□□ -1.23
SRSF4-204ENST00000489898 LOC105371267A0A1B0GV96 52 aa7.34□□□□□ -1.23
SRSF4-204ENST00000489898 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
SRSF4-204ENST00000489898 D6R8Y8 96 aa7.34□□□□□ -1.23
SRSF4-204ENST00000489898 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
SRSF4-204ENST00000489898 CARD19Q96LW7 228 aa7.34□□□□□ -1.23
SRSF4-204ENST00000489898 IGLV4-69A0A075B6H9 119 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.33□□□□□ -1.24
SRSF4-204ENST00000489898 VCYO14598 125 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 MAJINQ3KP22 176 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 KIAA1644Q3SXP7 199 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 STPG4Q8N801 248 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 TMEM18Q96B42 140 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 OPRPNQ99935 248 aaPredicted RBP7.33□□□□□ -1.24
SRSF4-204ENST00000489898 C20orf78Q9BR46 151 aa7.33□□□□□ -1.24
SRSF4-204ENST00000489898 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
SRSF4-204ENST00000489898 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
SRSF4-204ENST00000489898 PDZD11Q5EBL8 140 aa7.32□□□□□ -1.24
SRSF4-204ENST00000489898 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
SRSF4-204ENST00000489898 TMEM101Q96IK0 257 aa7.32□□□□□ -1.24
SRSF4-204ENST00000489898 PPBPP02775 128 aa7.31□□□□□ -1.24
SRSF4-204ENST00000489898 CKS2P33552 79 aa7.31□□□□□ -1.24
SRSF4-204ENST00000489898 COA6Q5JTJ3 125 aaKnown RBP7.31□□□□□ -1.24
SRSF4-204ENST00000489898 LINC00173Q6ZV60 143 aa7.31□□□□□ -1.24
SRSF4-204ENST00000489898 ORMDL3Q8N138 153 aa7.31□□□□□ -1.24
SRSF4-204ENST00000489898 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 HSBP1O75506 76 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 FABP4P15090 132 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
SRSF4-204ENST00000489898 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 SRSF9Q13242 221 aaKnown RBP eCLIP7.3□□□□□ -1.24
SRSF4-204ENST00000489898 SS18Q15532 418 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 HIST3H2BBQ8N257 126 aa7.3□□□□□ -1.24
SRSF4-204ENST00000489898 TRAV13-1A0A0B4J241 112 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 PRSS47A8MTI9 375 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 COX7A2LO14548 114 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 TCAPO15273 167 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 PPP1R17O96001 155 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 FCER1GP30273 86 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 KIAA0087Q14695 138 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 FA2HQ7L5A8 372 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
SRSF4-204ENST00000489898 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 KIR2DL4Q99706 377 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 ALKBH7Q9BT30 221 aaPredicted RBP7.29□□□□□ -1.24
SRSF4-204ENST00000489898 LAMTOR2Q9Y2Q5 125 aa7.29□□□□□ -1.24
SRSF4-204ENST00000489898 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 SERF1AO75920 110 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 C5orf38Q86SI9 138 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 C18orf32Q8TCD1 76 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 LINC01600Q96MT4 127 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 SPANXA1Q9NS26 97 aa7.28□□□□□ -1.24
SRSF4-204ENST00000489898 A0A0J9YXV3 536 aa7.27□□□□□ -1.25
SRSF4-204ENST00000489898 SMIM6P0DI80 62 aa7.27□□□□□ -1.25
SRSF4-204ENST00000489898 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
SRSF4-204ENST00000489898 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
SRSF4-204ENST00000489898 OR10D4PQ8NGN7 298 aa7.27□□□□□ -1.25
SRSF4-204ENST00000489898 CHCHD1Q96BP2 118 aaKnown RBP7.27□□□□□ -1.25
SRSF4-204ENST00000489898 APOMO95445 188 aa7.26□□□□□ -1.25
SRSF4-204ENST00000489898 HIST1H2BLQ99880 126 aa7.26□□□□□ -1.25
SRSF4-204ENST00000489898 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
SRSF4-204ENST00000489898 PLA2G2DQ9UNK4 145 aa7.26□□□□□ -1.25
SRSF4-204ENST00000489898 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
SRSF4-204ENST00000489898 ZNF561-AS1K7EIQ3 104 aa7.25□□□□□ -1.25
SRSF4-204ENST00000489898 LINC00242Q5T6M2 205 aa7.25□□□□□ -1.25
SRSF4-204ENST00000489898 ZC2HC1BQ5TFG8 222 aa7.25□□□□□ -1.25
SRSF4-204ENST00000489898 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
SRSF4-204ENST00000489898 MRPL35Q9NZE8 188 aaKnown RBP7.25□□□□□ -1.25
SRSF4-204ENST00000489898 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms