RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CRPP02741 224 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 IFNA4P05014 189 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 AKAIN1P0CW23 69 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 NFYAP23511 347 aaPredicted RBP1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 PYDC2Q56P42 97 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 GAFA1Q96PS6 74 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 SLC50A1Q9BRV3 221 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 PSMG3Q9BT73 122 aaPredicted RBP1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 SEC11CQ9BY50 192 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 SLC35B3Q9H1N7 401 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 NOTCH1P46531 2555 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 PNMA8CA0A1B0GUJ8 204 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 SLC25A26Q70HW3 274 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 OR4B1Q8NGF8 309 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 S100ZQ8WXG8 99 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 PDCD10Q9BUL8 212 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 TMEM191AQ9H0A3 160 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 NDUFB11Q9NX14 153 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 TAS2R4Q9NYW5 299 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 KAAG1Q9UBP8 84 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 ZFP30Q9Y2G7 519 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 MPC1Q9Y5U8 109 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 WNK1Q9H4A3 2382 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 DNAH9Q9NYC9 4486 aa1.71□□□□□ -2.14
DEPDC1-204ENST00000489862 IGHV3-64A0A075B6Q5 118 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 IGKV2D-24A0A075B6R9 120 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 MUC21A0A0G2JKD1 596 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 LOC107984156A0A0G2JMH3 177 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 MUC21A0A140T8X8 626 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 FNDC10F2Z333 226 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 PRB4P10163 310 aaPredicted RBP1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 TPT1P13693 172 aaKnown RBP1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 CCL3L1P16619 93 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 LINC00315P59091 139 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 LSM3P62310 102 aaKnown RBP1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 CATR1Q13166 79 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 CIRBPQ14011 172 aaKnown RBP1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 ZNF846Q147U1 533 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 TPRXLQ17RH7 258 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 PIGYQ3MUY2 71 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 KRTAP13-2Q52LG2 175 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 Q6ZUT4 128 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 ARL17AQ8IVW1 177 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 OR5AK2Q8NH90 309 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 HIGD2AQ9BW72 106 aa1.7□□□□□ -2.14
DEPDC1-204ENST00000489862 TRAV40A0A0B4J280 105 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 A0A0G2JQZ4 141 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 A0A1W2PNN7 141 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 GEMIN2O14893 280 aaKnown RBP1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 S100A8P05109 93 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 PYYP10082 97 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 CAV3P56539 151 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 PPP3R1P63098 170 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 MRPS36P82909 103 aaKnown RBP1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 DEFB112Q30KQ8 113 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 BRD3OSQ6XYD6 125 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 FP248Q71RG6 208 aaPredicted RBP1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 OR4X2Q8NGF9 303 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 RAB37Q96AX2 223 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 HYLS1Q96M11 299 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 METTL1Q9UBP6 276 aaKnown RBP1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TGP01266 2768 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TRBV20-1A0A075B6N2 111 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TRAV1-2A0A0B4J238 106 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 HMSDA8MTL9 139 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 ZNF705FA8MVS1 300 aaPredicted RBP1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TMEM14DPA8MWL7 114 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 G3V3Q6 166 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TRACP01848 142 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 HIST1H1BP16401 226 aaKnown RBP1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 ETV6P41212 452 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 ZNF90Q03938 601 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 LY6EQ16553 131 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TEX261Q6UWH6 196 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 VMO1Q7Z5L0 202 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 LINC00269Q8N2A0 174 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 OR8B3Q8NGG8 313 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 OR2T35Q8NGX2 323 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 Q8TAT8 98 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 SPACA4Q8TDM5 124 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 LEAP2Q969E1 77 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 CST11Q9H112 138 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 TAS2R8Q9NYW2 309 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
DEPDC1-204ENST00000489862 COL7A1Q02388 2944 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 IGLV10-54A0A075B6I4 117 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 hDV103S1A0JD37 113 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 SDHAF1A6NFY7 115 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 OOSP1A8MZH6 123 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 ZNF736B4DX44 427 aaPredicted RBP1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 PDCD5O14737 125 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 MPC2O95563 127 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 CTSGP08311 255 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 HINT1P49773 126 aaPredicted RBP1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 GNG4P50150 75 aa1.68□□□□□ -2.14
DEPDC1-204ENST00000489862 MRPS10P82664 201 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms