RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ATMQ13315 3056 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 ZNF462Q96JM2 2506 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3-49A0A0A0MS15 119 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 IBA57-AS1B1ANH7 110 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 KLLNB2CW77 178 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 F8WEM9 126 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 JMJD7-PLA2G4BH0Y9G9 81 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 NCR3O14931 201 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 BLCAPP62952 87 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 ADORA2A-AS1P86434 159 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 PRB3Q04118 309 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 PIK3CD-AS1Q5SR53 167 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 FAM74A4Q5TZK3 123 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 ARRDC1-AS1Q9H2J1 176 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 A0A087WYN8 130 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3-16A0A0C4DH30 117 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 CRPP02741 224 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 HOXD3P31249 432 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 CLEC19AQ6UXS0 136 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 Q6ZRU5 148 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 PRR15Q8IV56 129 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 Q8N6K4 173 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 UBL5Q9BZL1 73 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 ORMDL1Q9P0S3 153 aa3.42□□□□□ -1.86
SNRNP40-206ENST00000489853 APC2O95996 2303 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV7-81A0A0B4J1V7 117 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 PLAC8L1A1L4L8 177 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 CD164Q04900 197 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 WFDC9Q8NEX5 89 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 RMI2Q96E14 147 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 RELNP78509 3460 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 MYO18BQ8IUG5 2567 aa3.41□□□□□ -1.86
SNRNP40-206ENST00000489853 PRB1P04280 392 aa3.4□□□□□ -1.86
SNRNP40-206ENST00000489853 MINOS1Q5TGZ0 78 aa3.4□□□□□ -1.86
SNRNP40-206ENST00000489853 SMIM11BQ8TCY0 68 aa3.4□□□□□ -1.86
SNRNP40-206ENST00000489853 CHCHD7Q9BUK0 85 aa3.4□□□□□ -1.86
SNRNP40-206ENST00000489853 NBPF19A0A087WUL8 3843 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 IGKV2-29A2NJV5 120 aaPredicted RBP3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 LECT2O14960 151 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 MIFP14174 115 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 RPL36AP83881 106 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 SS18Q15532 418 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC00337Q8N6G1 96 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 RPL36ALQ969Q0 106 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 BPESC1Q9GZL8 116 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 TEX15Q9BXT5 2789 aa3.4□□□□□ -1.87
SNRNP40-206ENST00000489853 ODF3BA8MYP8 253 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 F6UB75 175 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 CCL21O00585 134 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 ERC2-IT1O76042 136 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 DEFB1P60022 68 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 SNRPD3P62318 126 aaKnown RBP3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC00167Q96N53 147 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 MOB4Q9Y3A3 225 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 FLNCQ14315 2725 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 PIEZO2Q9H5I5 2752 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 ABCA4P78363 2273 aa3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 UTP20O75691 2785 aaKnown RBP3.39□□□□□ -1.87
SNRNP40-206ENST00000489853 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 TRAV10A0A0B4J240 114 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 SMIM1B2RUZ4 78 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 TMEM256-PLSCR3K7ERE1 68 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 NDUFA4O00483 81 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 SAA4P35542 130 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 COX6A2Q02221 97 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 IGFL2Q6UWQ7 119 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 Q8N9W7 124 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 IGHV1OR15-1A0A075B7D0 117 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 ECSCRQ19T08 205 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 ESRGQ1W209 222 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 UNQ9165/PRO28630Q6UXU0 137 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 DEFB124Q8NES8 71 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 MPLKIPQ8TAP9 179 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 DYNLRB2Q8TF09 96 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 MINOS1-NBL1R4GNA1 71 aa3.38□□□□□ -1.87
SNRNP40-206ENST00000489853 ACACAQ13085 2346 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 TRBV7-4A0A0J9YYF1 115 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 SLPIP03973 132 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 CXCL6P80162 114 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC00467Q9BRT7 94 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 RETNQ9HD89 108 aa3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 UBR5O95071 2799 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 USP9XQ93008 2570 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-206ENST00000489853 IGHV3-38A0A0C4DH36 116 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 ATP6V0E1O15342 81 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC01547P58512 204 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms