RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 IGHV3-33P01772 117 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 ARMS2P0C7Q2 107 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 MRPL51Q4U2R6 128 aaKnown RBP4.17□□□□□ -1.74
CNOT9-207ENST00000489687 C10orf113Q5VZT2 155 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 Q6ZTC4 211 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 DAND5Q8N907 189 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 C20orf173Q96LM9 149 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 UPK3BQ9BT76 320 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 SHANK2-AS3Q9BTD1 123 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 JPT2Q9H910 190 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 XCL2Q9UBD3 114 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 KLK5Q9Y337 293 aaPredicted RBP4.17□□□□□ -1.74
CNOT9-207ENST00000489687 V9GYY9 64 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 PKD1P98161 4303 aa4.17□□□□□ -1.74
CNOT9-207ENST00000489687 TRGV11A0A075B6L2 103 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 TRAV12-2A0A075B6T6 113 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 LOC107984156A0A0G2JMH3 177 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 COX7A2P2O60397 106 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 TNFRSF6BO95407 300 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 IGHV3-30P01768 117 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 PRSS1P07477 247 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 CFC1BP0CG36 223 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 CFC1P0CG37 223 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 IGHV3-30-5P0DP03 117 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 LYZP61626 148 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 GNG5P63218 68 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
CNOT9-207ENST00000489687 ARL17AQ8IVW1 177 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 NTN5Q8WTR8 489 aaPredicted RBP4.16□□□□□ -1.74
CNOT9-207ENST00000489687 RNF125Q96EQ8 232 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 CHCHD5Q9BSY4 110 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 LAMTOR3Q9UHA4 124 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 PYGO1Q9Y3Y4 419 aa4.16□□□□□ -1.74
CNOT9-207ENST00000489687 IGHV4-4A0A075B6R2 117 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 IGKV1D-37A0A075B6S9 117 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 A0A0J9YY99 117 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 F6UB75 175 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 CKS2P33552 79 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 LEPP41159 167 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 PDE6HQ13956 83 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 FAM222AQ5U5X8 452 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 PATE2Q6UY27 113 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 GOLT1AQ6ZVE7 132 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
CNOT9-207ENST00000489687 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
CNOT9-207ENST00000489687 MRPS12O15235 138 aaKnown RBP4.14□□□□□ -1.75
CNOT9-207ENST00000489687 BUB3O43684 328 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 TRIAP1O43715 76 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 CMC4P56277 68 aaPredicted RBP4.14□□□□□ -1.75
CNOT9-207ENST00000489687 LAGE3Q14657 143 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 IGFL4Q6B9Z1 124 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 NEXN-AS1Q8NBZ9 246 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 CSNK1G2-AS1Q8NCQ2 148 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 TMEM263Q8WUH6 116 aaKnown RBP4.14□□□□□ -1.75
CNOT9-207ENST00000489687 RNF185Q96GF1 192 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 HSPG2P98160 4391 aa4.14□□□□□ -1.75
CNOT9-207ENST00000489687 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 TRAV13-1A0A0B4J241 112 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 SDHAF1A6NFY7 115 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 J3QQQ9 107 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 SOCS3O14543 225 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 PRM2P04554 102 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 MIFP14174 115 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 HTN3P15516 51 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 HERVK_113P61574 105 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 SNRPD3P62318 126 aaKnown RBP4.13□□□□□ -1.75
CNOT9-207ENST00000489687 RPL18AQ02543 176 aaKnown RBP4.13□□□□□ -1.75
CNOT9-207ENST00000489687 ZNF415Q09FC8 603 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 ORMDL2Q53FV1 153 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 RNF182Q8N6D2 247 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 Q9H3A6 140 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 NACAE9PAV3 2078 aa4.13□□□□□ -1.75
CNOT9-207ENST00000489687 A0A087WWL8 130 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 TRAV10A0A0B4J240 114 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 TEX49A0A1B0GTD5 131 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 C11orf86A6NJI1 115 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 M0R2N4 97 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 LST1O00453 97 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 COX6CP09669 75 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 PYYP10082 97 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
CNOT9-207ENST00000489687 ZNF56Q15929 161 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 C4orf26Q17RF5 130 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 LYZL1Q6UWQ5 148 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 C2orf82Q6UX34 121 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 LINC00336Q6ZUF6 198 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 C17orf77Q96MU5 243 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 DPH3P1Q9H4G8 78 aa4.12□□□□□ -1.75
CNOT9-207ENST00000489687 DNAH5Q8TE73 4624 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms