RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PPP1R17O96001 155 aa10.19□□□□□ -0.78
TOP3B-217ENST00000489581 IGHV3OR16-9A0A0B4J2B5 98 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 UBE2D1P51668 147 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 RPL39P62891 51 aaKnown RBP10.18□□□□□ -0.78
TOP3B-217ENST00000489581 RIGQ13278 110 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 LINC01551Q86U37 167 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
TOP3B-217ENST00000489581 F8WDY8 70 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 TMEM241Q24JQ0 296 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 OSTCQ9NRP0 149 aa10.17□□□□□ -0.78
TOP3B-217ENST00000489581 UBE2BP63146 152 aa10.16□□□□□ -0.78
TOP3B-217ENST00000489581 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
TOP3B-217ENST00000489581 M0QXV9 152 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 BLOC1S1P78537 153 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 KRTAP9-2Q9BYQ4 174 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.78
TOP3B-217ENST00000489581 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 TCTE3Q8IZS6 198 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 V9GYV3 84 aa10.14□□□□□ -0.79
TOP3B-217ENST00000489581 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
TOP3B-217ENST00000489581 RPL13AP40429 203 aaKnown RBP10.13□□□□□ -0.79
TOP3B-217ENST00000489581 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 C20orf78Q9BR46 151 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 EIF5A2Q9GZV4 153 aaKnown RBP10.12□□□□□ -0.79
TOP3B-217ENST00000489581 SPANXA1Q9NS26 97 aa10.12□□□□□ -0.79
TOP3B-217ENST00000489581 HBBP68871 147 aa10.11□□□□□ -0.79
TOP3B-217ENST00000489581 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
TOP3B-217ENST00000489581 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
TOP3B-217ENST00000489581 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 TCAPO15273 167 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 TSPAN13O95857 204 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 CKS2P33552 79 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
TOP3B-217ENST00000489581 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
TOP3B-217ENST00000489581 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
TOP3B-217ENST00000489581 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
TOP3B-217ENST00000489581 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
TOP3B-217ENST00000489581 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
TOP3B-217ENST00000489581 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 ZNF861PO60384 105 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
TOP3B-217ENST00000489581 D6R8Y8 96 aa10.06□□□□□ -0.8
TOP3B-217ENST00000489581 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
TOP3B-217ENST00000489581 NPYP01303 97 aa10.05□□□□□ -0.8
TOP3B-217ENST00000489581 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
TOP3B-217ENST00000489581 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
TOP3B-217ENST00000489581 RPL23P62829 140 aaKnown RBP10.04□□□□□ -0.8
TOP3B-217ENST00000489581 IFI27P40305 119 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-217ENST00000489581 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
TOP3B-217ENST00000489581 A0A1B0GW15 77 aa10.02□□□□□ -0.81
TOP3B-217ENST00000489581 ADIRFQ15847 76 aa10.02□□□□□ -0.81
TOP3B-217ENST00000489581 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.81
TOP3B-217ENST00000489581 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
TOP3B-217ENST00000489581 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
TOP3B-217ENST00000489581 RAB5AP20339 215 aa10.01□□□□□ -0.81
TOP3B-217ENST00000489581 CTDSP1Q9GZU7 261 aa10.01□□□□□ -0.81
TOP3B-217ENST00000489581 A0A087X002 238 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 NUPR1O60356 82 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 TMEM141Q96I45 108 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
TOP3B-217ENST00000489581 F8W036 122 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
TOP3B-217ENST00000489581 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 PPBPP02775 128 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 PRSS2P07478 247 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 LINC01561Q8N1V8 128 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
TOP3B-217ENST00000489581 S100A8P05109 93 aa9.97□□□□□ -0.81
TOP3B-217ENST00000489581 CKS1BP61024 79 aa9.97□□□□□ -0.81
TOP3B-217ENST00000489581 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
TOP3B-217ENST00000489581 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
TOP3B-217ENST00000489581 A0A1B0GXF2 115 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 C9JQL5 133 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 CRYGAP11844 174 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 Q6ZN92 141 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
TOP3B-217ENST00000489581 RPL28P46779 137 aaKnown RBP9.95□□□□□ -0.82
TOP3B-217ENST00000489581 AKAP14Q86UN6 197 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 C2orf88Q9BSF0 95 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 ANAPC11Q9NYG5 84 aa9.95□□□□□ -0.82
TOP3B-217ENST00000489581 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
TOP3B-217ENST00000489581 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms