RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
SMARCD3-213ENST00000489503 CHAC1Q9BUX1 264 aa7.87□□□□□ -1.15
SMARCD3-213ENST00000489503 VPS13BQ7Z7G8 4022 aa7.87□□□□□ -1.15
SMARCD3-213ENST00000489503 IGHV3-64A0A075B6Q5 118 aa7.86□□□□□ -1.15
SMARCD3-213ENST00000489503 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.86□□□□□ -1.15
SMARCD3-213ENST00000489503 IGIPA6NJ69 53 aa7.86□□□□□ -1.15
SMARCD3-213ENST00000489503 K7EMI3 77 aa7.86□□□□□ -1.15
SMARCD3-213ENST00000489503 TEX43Q6ZNM6 134 aa7.86□□□□□ -1.15
SMARCD3-213ENST00000489503 FA2HQ7L5A8 372 aa7.86□□□□□ -1.15
SMARCD3-213ENST00000489503 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 UBE2D1P51668 147 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 COX6A2Q02221 97 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 LINC00242Q5T6M2 205 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 Q6ZN92 141 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 C18orf32Q8TCD1 76 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 TOMM6Q96B49 74 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 CARD19Q96LW7 228 aa7.85□□□□□ -1.15
SMARCD3-213ENST00000489503 IGHV3OR16-9A0A0B4J2B5 98 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 LINC01546A6NGU7 62 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 SPAG11BQ08648 103 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 ORAOV1Q8WV07 137 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 AMELXQ99217 191 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 C2orf88Q9BSF0 95 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 SMCO4Q9NRQ5 59 aa7.84□□□□□ -1.15
SMARCD3-213ENST00000489503 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
SMARCD3-213ENST00000489503 SYCNQ0VAF6 134 aa7.83□□□□□ -1.16
SMARCD3-213ENST00000489503 Q6ZRU5 148 aa7.83□□□□□ -1.16
SMARCD3-213ENST00000489503 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
SMARCD3-213ENST00000489503 VCX2Q9H322 139 aa7.83□□□□□ -1.16
SMARCD3-213ENST00000489503 A0A096LNI7 61 aa7.82□□□□□ -1.16
SMARCD3-213ENST00000489503 PMCHL1Q16048 86 aa7.82□□□□□ -1.16
SMARCD3-213ENST00000489503 CAMK2N2Q96S95 79 aa7.82□□□□□ -1.16
SMARCD3-213ENST00000489503 TIMM17AQ99595 171 aa7.82□□□□□ -1.16
SMARCD3-213ENST00000489503 A0A096LNJ9 63 aa7.81□□□□□ -1.16
SMARCD3-213ENST00000489503 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
SMARCD3-213ENST00000489503 APOMO95445 188 aa7.81□□□□□ -1.16
SMARCD3-213ENST00000489503 SPACA4Q8TDM5 124 aa7.81□□□□□ -1.16
SMARCD3-213ENST00000489503 A0A0J9YXV3 536 aa7.8□□□□□ -1.16
SMARCD3-213ENST00000489503 NPSP0C0P6 89 aa7.8□□□□□ -1.16
SMARCD3-213ENST00000489503 CIRBPQ14011 172 aaKnown RBP7.8□□□□□ -1.16
SMARCD3-213ENST00000489503 MAJINQ3KP22 176 aa7.8□□□□□ -1.16
SMARCD3-213ENST00000489503 ERASQ7Z444 233 aa7.8□□□□□ -1.16
SMARCD3-213ENST00000489503 OR10D4PQ8NGN7 298 aa7.8□□□□□ -1.16
SMARCD3-213ENST00000489503 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
SMARCD3-213ENST00000489503 A0A087WYN8 130 aa7.79□□□□□ -1.16
SMARCD3-213ENST00000489503 A0A087WZ39 114 aa7.79□□□□□ -1.16
SMARCD3-213ENST00000489503 G0S2P27469 103 aa7.79□□□□□ -1.16
SMARCD3-213ENST00000489503 C10orf25Q5T742 122 aa7.79□□□□□ -1.16
SMARCD3-213ENST00000489503 SCO1O75880 301 aa7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 LINC00614P0C842 121 aa7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 DPH3Q96FX2 82 aa7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
SMARCD3-213ENST00000489503 HBDP02042 147 aa7.77□□□□□ -1.17
SMARCD3-213ENST00000489503 TRGC2P03986 189 aa7.77□□□□□ -1.17
SMARCD3-213ENST00000489503 C2orf82Q6UX34 121 aa7.77□□□□□ -1.17
SMARCD3-213ENST00000489503 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
SMARCD3-213ENST00000489503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 RPL18AQ02543 176 aaKnown RBP7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 KIAA0087Q14695 138 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 UNQ6190/PRO20217Q6UXQ8 127 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 FAM19A3Q7Z5A8 133 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 STPG4Q8N801 248 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 CST9LQ9H4G1 147 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 GEMIN7Q9H840 131 aaKnown RBP7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 TOMM7Q9P0U1 55 aa7.76□□□□□ -1.17
SMARCD3-213ENST00000489503 LOC107984640A0A0U1RRK4 108 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 NDUFA1O15239 70 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 NDUFA6P56556 154 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 HERVK_113P63121 156 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 PMVKQ15126 192 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 PDZD11Q5EBL8 140 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 LINC00469Q8N7U9 141 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 PLAC8Q9NZF1 115 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 C6orf48Q9UBA6 75 aa7.75□□□□□ -1.17
SMARCD3-213ENST00000489503 LINC01549A6NIU2 74 aa7.74□□□□□ -1.17
SMARCD3-213ENST00000489503 COLCA2A8K830 154 aa7.74□□□□□ -1.17
SMARCD3-213ENST00000489503 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
SMARCD3-213ENST00000489503 RAB5BP61020 215 aa7.74□□□□□ -1.17
SMARCD3-213ENST00000489503 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
SMARCD3-213ENST00000489503 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
SMARCD3-213ENST00000489503 PKHD1L1Q86WI1 4243 aa7.73□□□□□ -1.17
SMARCD3-213ENST00000489503 SEC11AP67812 179 aa7.73□□□□□ -1.17
SMARCD3-213ENST00000489503 LINC01561Q8N1V8 128 aa7.73□□□□□ -1.17
SMARCD3-213ENST00000489503 PACRGQ96M98 296 aaPredicted RBP7.73□□□□□ -1.17
SMARCD3-213ENST00000489503 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
SMARCD3-213ENST00000489503 TINCRA0A1B0GVN0 87 aa7.72□□□□□ -1.17
SMARCD3-213ENST00000489503 SMIM1B2RUZ4 78 aa7.72□□□□□ -1.17
SMARCD3-213ENST00000489503 PRSS2P07478 247 aa7.72□□□□□ -1.17
SMARCD3-213ENST00000489503 SPINK8P0C7L1 97 aa7.72□□□□□ -1.17
SMARCD3-213ENST00000489503 LINC00310P59036 64 aa7.72□□□□□ -1.17
SMARCD3-213ENST00000489503 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms