RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 NAT8BQ9UHF3 227 aa7.54□□□□□ -1.2
CPSF3-204ENST00000489403 TRBV24-1A0A075B6N3 115 aa7.53□□□□□ -1.2
CPSF3-204ENST00000489403 IGHV3OR16-9A0A0B4J2B5 98 aa7.53□□□□□ -1.2
CPSF3-204ENST00000489403 FAM168BA1KXE4 195 aa7.53□□□□□ -1.2
CPSF3-204ENST00000489403 LINC00862A6NCI5 91 aa7.53□□□□□ -1.2
CPSF3-204ENST00000489403 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
CPSF3-204ENST00000489403 RPL23P62829 140 aaKnown RBP7.53□□□□□ -1.2
CPSF3-204ENST00000489403 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
CPSF3-204ENST00000489403 C20orf78Q9BR46 151 aa7.53□□□□□ -1.2
CPSF3-204ENST00000489403 F8WDY8 70 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 NDUFA1O15239 70 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 FAM74A3Q4VXF1 159 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 C10orf25Q5T742 122 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 PRR26Q8N8Z3 221 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 IMMP2LQ96T52 175 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
CPSF3-204ENST00000489403 SMIM27A0A1W2PRY6 76 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 H0Y9J4 135 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 TCAPO15273 167 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 CKS2P33552 79 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 TMEM241Q24JQ0 296 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 UNQ6190/PRO20217Q6UXQ8 127 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 FAM19A5Q7Z5A7 132 aaPredicted RBP7.51□□□□□ -1.21
CPSF3-204ENST00000489403 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 C6orf48Q9UBA6 75 aa7.51□□□□□ -1.21
CPSF3-204ENST00000489403 A0A087WZ39 114 aa7.5□□□□□ -1.21
CPSF3-204ENST00000489403 IFITM10A6NMD0 228 aa7.5□□□□□ -1.21
CPSF3-204ENST00000489403 GHRHP01286 108 aa7.5□□□□□ -1.21
CPSF3-204ENST00000489403 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
CPSF3-204ENST00000489403 HBBP68871 147 aa7.5□□□□□ -1.21
CPSF3-204ENST00000489403 MRPS36P82909 103 aaKnown RBP7.5□□□□□ -1.21
CPSF3-204ENST00000489403 ADIRFQ15847 76 aa7.5□□□□□ -1.21
CPSF3-204ENST00000489403 hCG_2014768A0A024R1R8 64 aa7.49□□□□□ -1.21
CPSF3-204ENST00000489403 A0A1B0GW15 77 aa7.49□□□□□ -1.21
CPSF3-204ENST00000489403 D6R8Y8 96 aa7.49□□□□□ -1.21
CPSF3-204ENST00000489403 NPYP01303 97 aa7.49□□□□□ -1.21
CPSF3-204ENST00000489403 KRTAP7-1Q8IUC3 87 aa7.49□□□□□ -1.21
CPSF3-204ENST00000489403 SMDT1Q9H4I9 107 aa7.49□□□□□ -1.21
CPSF3-204ENST00000489403 C9JQL5 133 aa7.48□□□□□ -1.21
CPSF3-204ENST00000489403 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
CPSF3-204ENST00000489403 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
CPSF3-204ENST00000489403 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
CPSF3-204ENST00000489403 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
CPSF3-204ENST00000489403 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
CPSF3-204ENST00000489403 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
CPSF3-204ENST00000489403 TGIF2-C20orf24A0A0A6YYL0 155 aa7.47□□□□□ -1.21
CPSF3-204ENST00000489403 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
CPSF3-204ENST00000489403 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
CPSF3-204ENST00000489403 F8W036 122 aa7.46□□□□□ -1.22
CPSF3-204ENST00000489403 M0QXV9 152 aa7.46□□□□□ -1.22
CPSF3-204ENST00000489403 UBE2BP63146 152 aa7.46□□□□□ -1.22
CPSF3-204ENST00000489403 IGLV4-3A0A075B6K6 122 aa7.45□□□□□ -1.22
CPSF3-204ENST00000489403 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
CPSF3-204ENST00000489403 S100A8P05109 93 aa7.45□□□□□ -1.22
CPSF3-204ENST00000489403 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
CPSF3-204ENST00000489403 SRSF3P84103 164 aaKnown RBP7.45□□□□□ -1.22
CPSF3-204ENST00000489403 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
CPSF3-204ENST00000489403 TRBV30A0A0K0K1B3 111 aa7.44□□□□□ -1.22
CPSF3-204ENST00000489403 PPBPP02775 128 aa7.44□□□□□ -1.22
CPSF3-204ENST00000489403 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
CPSF3-204ENST00000489403 C2orf82Q6UX34 121 aa7.44□□□□□ -1.22
CPSF3-204ENST00000489403 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
CPSF3-204ENST00000489403 NDUFC2-KCTD14E9PQ53 114 aa7.43□□□□□ -1.22
CPSF3-204ENST00000489403 RAB5AP20339 215 aa7.43□□□□□ -1.22
CPSF3-204ENST00000489403 ORMDL3Q8N138 153 aa7.43□□□□□ -1.22
CPSF3-204ENST00000489403 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
CPSF3-204ENST00000489403 UBE2D1P51668 147 aa7.42□□□□□ -1.22
CPSF3-204ENST00000489403 PEA15Q15121 130 aa7.42□□□□□ -1.22
CPSF3-204ENST00000489403 TMEM136Q6ZRR5 245 aa7.42□□□□□ -1.22
CPSF3-204ENST00000489403 PACRGQ96M98 296 aaPredicted RBP7.42□□□□□ -1.22
CPSF3-204ENST00000489403 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
CPSF3-204ENST00000489403 MUC2Q02817 5179 aa7.42□□□□□ -1.22
CPSF3-204ENST00000489403 TEX43Q6ZNM6 134 aa7.41□□□□□ -1.22
CPSF3-204ENST00000489403 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
CPSF3-204ENST00000489403 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
CPSF3-204ENST00000489403 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
CPSF3-204ENST00000489403 PRR4Q16378 134 aa7.4□□□□□ -1.22
CPSF3-204ENST00000489403 ZC2HC1BQ5TFG8 222 aa7.4□□□□□ -1.22
CPSF3-204ENST00000489403 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
CPSF3-204ENST00000489403 LOC389332A0A1B0GUA5 103 aa7.39□□□□□ -1.23
CPSF3-204ENST00000489403 LINC00173Q6ZV60 143 aa7.39□□□□□ -1.23
CPSF3-204ENST00000489403 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
CPSF3-204ENST00000489403 ZNF861PO60384 105 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 C2orf66Q6UXQ4 117 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 LINC00469Q8N7U9 141 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 AMELXQ99217 191 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 MAP1LC3AQ9H492 121 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
CPSF3-204ENST00000489403 CARHSP1Q9Y2V2 147 aaKnown RBP7.38□□□□□ -1.23
CPSF3-204ENST00000489403 PRSS2P07478 247 aa7.37□□□□□ -1.23
CPSF3-204ENST00000489403 Q6ZN92 141 aa7.37□□□□□ -1.23
CPSF3-204ENST00000489403 LAMTOR2Q9Y2Q5 125 aa7.37□□□□□ -1.23
CPSF3-204ENST00000489403 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
CPSF3-204ENST00000489403 NUPR1O60356 82 aa7.36□□□□□ -1.23
CPSF3-204ENST00000489403 CKS1BP61024 79 aa7.36□□□□□ -1.23
CPSF3-204ENST00000489403 FAM19A3Q7Z5A8 133 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms