RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 TMEM141Q96I45 108 aa15.29■□□□□ 0.04
PTPN18-213ENST00000489215 C2orf48Q96LS8 159 aa15.29■□□□□ 0.04
PTPN18-213ENST00000489215 CARHSP1Q9Y2V2 147 aaKnown RBP15.29■□□□□ 0.04
PTPN18-213ENST00000489215 C2orf66Q6UXQ4 117 aa15.28■□□□□ 0.04
PTPN18-213ENST00000489215 Q6ZN92 141 aa15.28■□□□□ 0.04
PTPN18-213ENST00000489215 OR10D4PQ8NGN7 298 aa15.28■□□□□ 0.04
PTPN18-213ENST00000489215 OPRPNQ99935 248 aaPredicted RBP15.28■□□□□ 0.04
PTPN18-213ENST00000489215 VPS13BQ7Z7G8 4022 aa15.28■□□□□ 0.04
PTPN18-213ENST00000489215 IGLV4-69A0A075B6H9 119 aa15.27■□□□□ 0.04
PTPN18-213ENST00000489215 F8WDY8 70 aa15.27■□□□□ 0.04
PTPN18-213ENST00000489215 TEX43Q6ZNM6 134 aa15.27■□□□□ 0.04
PTPN18-213ENST00000489215 PLAC8Q9NZF1 115 aa15.27■□□□□ 0.04
PTPN18-213ENST00000489215 IGLV4-3A0A075B6K6 122 aa15.26■□□□□ 0.03
PTPN18-213ENST00000489215 IGHV3OR16-9A0A0B4J2B5 98 aa15.26■□□□□ 0.03
PTPN18-213ENST00000489215 CHTF8P0CG12 524 aa15.26■□□□□ 0.03
PTPN18-213ENST00000489215 LINC00526Q96FQ7 95 aa15.26■□□□□ 0.03
PTPN18-213ENST00000489215 CAMK2N2Q96S95 79 aa15.26■□□□□ 0.03
PTPN18-213ENST00000489215 C2orf88Q9BSF0 95 aa15.26■□□□□ 0.03
PTPN18-213ENST00000489215 TGIF2-C20orf24A0A0A6YYL0 155 aa15.25■□□□□ 0.03
PTPN18-213ENST00000489215 MT-ND6P03923 174 aa15.25■□□□□ 0.03
PTPN18-213ENST00000489215 MAJINQ3KP22 176 aa15.25■□□□□ 0.03
PTPN18-213ENST00000489215 PAPPA-AS1Q5QFB9 102 aa15.25■□□□□ 0.03
PTPN18-213ENST00000489215 RPS10P5Q9NQ39 176 aa15.25■□□□□ 0.03
PTPN18-213ENST00000489215 IGKV2-24A0A0C4DH68 120 aa15.24■□□□□ 0.03
PTPN18-213ENST00000489215 LINC01549A6NIU2 74 aa15.23■□□□□ 0.03
PTPN18-213ENST00000489215 KRTAP10-4P60372 401 aaPredicted RBP15.23■□□□□ 0.03
PTPN18-213ENST00000489215 KIAA1644Q3SXP7 199 aa15.23■□□□□ 0.03
PTPN18-213ENST00000489215 VCX2Q9H322 139 aa15.23■□□□□ 0.03
PTPN18-213ENST00000489215 FLG2Q5D862 2391 aaPredicted RBP15.22■□□□□ 0.03
PTPN18-213ENST00000489215 LOC107984640A0A0U1RRK4 108 aa15.22■□□□□ 0.03
PTPN18-213ENST00000489215 SPAG11BQ08648 103 aa15.22■□□□□ 0.03
PTPN18-213ENST00000489215 NDUFA5Q16718 116 aa15.22■□□□□ 0.03
PTPN18-213ENST00000489215 C7orf33Q8WU49 177 aa15.22■□□□□ 0.03
PTPN18-213ENST00000489215 A0A096LNI7 61 aa15.21■□□□□ 0.03
PTPN18-213ENST00000489215 RNF151Q2KHN1 245 aa15.21■□□□□ 0.03
PTPN18-213ENST00000489215 STPG4Q8N801 248 aa15.21■□□□□ 0.03
PTPN18-213ENST00000489215 Q6ZRU5 148 aa15.2■□□□□ 0.02
PTPN18-213ENST00000489215 ORAOV1Q8WV07 137 aa15.2■□□□□ 0.02
PTPN18-213ENST00000489215 A0A087WZ39 114 aa15.19■□□□□ 0.02
PTPN18-213ENST00000489215 IGIPA6NJ69 53 aa15.19■□□□□ 0.02
PTPN18-213ENST00000489215 LINC00242Q5T6M2 205 aa15.19■□□□□ 0.02
PTPN18-213ENST00000489215 J3QL48 77 aa15.18■□□□□ 0.02
PTPN18-213ENST00000489215 SEC11AP67812 179 aa15.18■□□□□ 0.02
PTPN18-213ENST00000489215 LINC01561Q8N1V8 128 aa15.18■□□□□ 0.02
PTPN18-213ENST00000489215 AMELXQ99217 191 aa15.18■□□□□ 0.02
PTPN18-213ENST00000489215 TIMM17AQ99595 171 aa15.18■□□□□ 0.02
PTPN18-213ENST00000489215 KRTAP29-1A8MX34 341 aaPredicted RBP15.17■□□□□ 0.02
PTPN18-213ENST00000489215 SNAPINO95295 136 aa15.17■□□□□ 0.02
PTPN18-213ENST00000489215 UBE2D1P51668 147 aa15.17■□□□□ 0.02
PTPN18-213ENST00000489215 TOMM6Q96B49 74 aa15.17■□□□□ 0.02
PTPN18-213ENST00000489215 ALKBH7Q9BT30 221 aaPredicted RBP15.17■□□□□ 0.02
PTPN18-213ENST00000489215 NDUFA1O15239 70 aa15.16■□□□□ 0.02
PTPN18-213ENST00000489215 PTTG1IPP53801 180 aa15.16■□□□□ 0.02
PTPN18-213ENST00000489215 FABP9Q0Z7S8 132 aa15.16■□□□□ 0.02
PTPN18-213ENST00000489215 SVBPQ8N300 66 aa15.16■□□□□ 0.02
PTPN18-213ENST00000489215 MRPL18Q9H0U6 180 aaKnown RBP15.16■□□□□ 0.02
PTPN18-213ENST00000489215 MRPL35Q9NZE8 188 aaKnown RBP15.16■□□□□ 0.02
PTPN18-213ENST00000489215 DMBT1Q9UGM3 2413 aaPredicted RBP15.15■□□□□ 0.02
PTPN18-213ENST00000489215 APOC3P02656 99 aa15.15■□□□□ 0.02
PTPN18-213ENST00000489215 ERASQ7Z444 233 aa15.15■□□□□ 0.02
PTPN18-213ENST00000489215 FAM19A3Q7Z5A8 133 aa15.14■□□□□ 0.01
PTPN18-213ENST00000489215 LINC01546A6NGU7 62 aa15.13■□□□□ 0.01
PTPN18-213ENST00000489215 OXTP01178 125 aa15.13■□□□□ 0.01
PTPN18-213ENST00000489215 GAGE2BQ13066 116 aa15.13■□□□□ 0.01
PTPN18-213ENST00000489215 LINC00173Q6ZV60 143 aa15.12■□□□□ 0.01
PTPN18-213ENST00000489215 SCGB3A1Q96QR1 104 aa15.12■□□□□ 0.01
PTPN18-213ENST00000489215 SMCO4Q9NRQ5 59 aa15.12■□□□□ 0.01
PTPN18-213ENST00000489215 HERVK_113P63121 156 aa15.11■□□□□ 0.01
PTPN18-213ENST00000489215 FA2HQ7L5A8 372 aa15.11■□□□□ 0.01
PTPN18-213ENST00000489215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.1■□□□□ 0.01
PTPN18-213ENST00000489215 TRAPPC1Q9Y5R8 145 aa15.09■□□□□ 0.01
PTPN18-213ENST00000489215 RPL18AQ02543 176 aaKnown RBP15.08■□□□□ 0
PTPN18-213ENST00000489215 GEMIN7Q9H840 131 aaKnown RBP15.08■□□□□ 0
PTPN18-213ENST00000489215 TLX1NBP0CAT3 122 aa15.07■□□□□ 0
PTPN18-213ENST00000489215 TRBV30A0A0K0K1B3 111 aa15.06■□□□□ 0
PTPN18-213ENST00000489215 PRSS2P07478 247 aa15.06■□□□□ 0
PTPN18-213ENST00000489215 KIAA0087Q14695 138 aa15.06■□□□□ 0
PTPN18-213ENST00000489215 ZC2HC1BQ5TFG8 222 aa15.06■□□□□ 0
PTPN18-213ENST00000489215 MYCBP2O75592 4640 aa15.05■□□□□ 0
PTPN18-213ENST00000489215 UNQ6190/PRO20217Q6UXQ8 127 aa15.05■□□□□ -0
PTPN18-213ENST00000489215 PACRGQ96M98 296 aaPredicted RBP15.05■□□□□ -0
PTPN18-213ENST00000489215 A0A0J9YXV3 536 aa15.04■□□□□ -0
PTPN18-213ENST00000489215 CKS1BP61024 79 aa15.02■□□□□ -0
PTPN18-213ENST00000489215 C6orf226Q5I0X4 101 aa15.02■□□□□ -0
PTPN18-213ENST00000489215 C10orf25Q5T742 122 aa15.02■□□□□ -0
PTPN18-213ENST00000489215 Q8IZM0 81 aa15.02■□□□□ -0
PTPN18-213ENST00000489215 C6orf48Q9UBA6 75 aa15.02■□□□□ -0
PTPN18-213ENST00000489215 LINC00614P0C842 121 aa15.01□□□□□ -0.01
PTPN18-213ENST00000489215 HNRNPA3P51991 378 aaKnown RBP15.01□□□□□ -0.01
PTPN18-213ENST00000489215 RAB5BP61020 215 aa15.01□□□□□ -0.01
PTPN18-213ENST00000489215 C9orf116Q5BN46 136 aaPredicted RBP15.01□□□□□ -0.01
PTPN18-213ENST00000489215 Q6ZRP5 223 aa15.01□□□□□ -0.01
PTPN18-213ENST00000489215 TINCRA0A1B0GVN0 87 aa15□□□□□ -0.01
PTPN18-213ENST00000489215 PRR3P79522 188 aaKnown RBP15□□□□□ -0.01
PTPN18-213ENST00000489215 CDKN2A-AS1Q9UH64 79 aa15□□□□□ -0.01
PTPN18-213ENST00000489215 A0A1W2PNN7 141 aa14.99□□□□□ -0.01
PTPN18-213ENST00000489215 PMVKQ15126 192 aa14.99□□□□□ -0.01
PTPN18-213ENST00000489215 C18orf32Q8TCD1 76 aa14.99□□□□□ -0.01
PTPN18-213ENST00000489215 TOMM7Q9P0U1 55 aa14.99□□□□□ -0.01
PTPN18-213ENST00000489215 CST9LQ9H4G1 147 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms