RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PRELID3AQ96N28 172 aa7.44□□□□□ -1.22
CCHCR1-215ENST00000488920 A0A1W2PNN7 141 aa7.43□□□□□ -1.22
CCHCR1-215ENST00000488920 IFITM10A6NMD0 228 aa7.43□□□□□ -1.22
CCHCR1-215ENST00000488920 MRPS36P82909 103 aaKnown RBP7.43□□□□□ -1.22
CCHCR1-215ENST00000488920 SPAG11BQ08648 103 aa7.43□□□□□ -1.22
CCHCR1-215ENST00000488920 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
CCHCR1-215ENST00000488920 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
CCHCR1-215ENST00000488920 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.42□□□□□ -1.22
CCHCR1-215ENST00000488920 RAB14P61106 215 aa7.42□□□□□ -1.22
CCHCR1-215ENST00000488920 ORAOV1Q8WV07 137 aa7.42□□□□□ -1.22
CCHCR1-215ENST00000488920 MT-ND4LP03901 98 aa7.41□□□□□ -1.22
CCHCR1-215ENST00000488920 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
CCHCR1-215ENST00000488920 Q6ZRP5 223 aa7.41□□□□□ -1.22
CCHCR1-215ENST00000488920 OR10D4PQ8NGN7 298 aa7.41□□□□□ -1.22
CCHCR1-215ENST00000488920 IFI27P40305 119 aaPredicted RBP7.4□□□□□ -1.22
CCHCR1-215ENST00000488920 PNRC1Q12796 327 aaPredicted RBP7.4□□□□□ -1.22
CCHCR1-215ENST00000488920 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
CCHCR1-215ENST00000488920 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
CCHCR1-215ENST00000488920 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
CCHCR1-215ENST00000488920 LINC01600Q96MT4 127 aa7.4□□□□□ -1.22
CCHCR1-215ENST00000488920 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.23
CCHCR1-215ENST00000488920 IGLV4-3A0A075B6K6 122 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 C10orf25Q5T742 122 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 UNQ6190/PRO20217Q6UXQ8 127 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 MAP1LC3AQ9H492 121 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 PYGO1Q9Y3Y4 419 aa7.39□□□□□ -1.23
CCHCR1-215ENST00000488920 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
CCHCR1-215ENST00000488920 LINC00242Q5T6M2 205 aa7.38□□□□□ -1.23
CCHCR1-215ENST00000488920 Q8N8P6 123 aa7.38□□□□□ -1.23
CCHCR1-215ENST00000488920 TMEM141Q96I45 108 aa7.38□□□□□ -1.23
CCHCR1-215ENST00000488920 MRPL35Q9NZE8 188 aaKnown RBP7.38□□□□□ -1.23
CCHCR1-215ENST00000488920 LAMTOR2Q9Y2Q5 125 aa7.38□□□□□ -1.23
CCHCR1-215ENST00000488920 A0A087WZ39 114 aa7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 F8WDY8 70 aa7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 NDUFA1O15239 70 aa7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 ODF1Q14990 250 aa7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 ZC2HC1BQ5TFG8 222 aa7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 PHF5AQ7RTV0 110 aaKnown RBP7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 IMMP2LQ96T52 175 aa7.37□□□□□ -1.23
CCHCR1-215ENST00000488920 TNXBP22105 4242 aa7.36□□□□□ -1.23
CCHCR1-215ENST00000488920 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
CCHCR1-215ENST00000488920 TEX43Q6ZNM6 134 aa7.36□□□□□ -1.23
CCHCR1-215ENST00000488920 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
CCHCR1-215ENST00000488920 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
CCHCR1-215ENST00000488920 CYSLTR1Q9Y271 337 aa7.36□□□□□ -1.23
CCHCR1-215ENST00000488920 FAM168BA1KXE4 195 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 MT-ND6P03923 174 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 UBE2D1P51668 147 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 CLLU1Q5K131 121 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 VCX2Q9H322 139 aa7.35□□□□□ -1.23
CCHCR1-215ENST00000488920 KRTAP10-8P60410 259 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 GAGE2EQ4V326 116 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 ORMDL2Q53FV1 153 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 C2orf82Q6UX34 121 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 Q6ZN92 141 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 C2orf88Q9BSF0 95 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 GAGE2DQ9UEU5 116 aa7.34□□□□□ -1.23
CCHCR1-215ENST00000488920 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
CCHCR1-215ENST00000488920 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
CCHCR1-215ENST00000488920 KIAA1644Q3SXP7 199 aa7.33□□□□□ -1.24
CCHCR1-215ENST00000488920 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
CCHCR1-215ENST00000488920 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
CCHCR1-215ENST00000488920 AMELXQ99217 191 aa7.33□□□□□ -1.24
CCHCR1-215ENST00000488920 ADCYAP1P18509 176 aa7.32□□□□□ -1.24
CCHCR1-215ENST00000488920 FAM19A5Q7Z5A7 132 aaPredicted RBP7.32□□□□□ -1.24
CCHCR1-215ENST00000488920 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
CCHCR1-215ENST00000488920 TMEM218A2RU14 115 aa7.31□□□□□ -1.24
CCHCR1-215ENST00000488920 K7EMI3 77 aa7.31□□□□□ -1.24
CCHCR1-215ENST00000488920 KRTAP11-1Q8IUC1 163 aa7.31□□□□□ -1.24
CCHCR1-215ENST00000488920 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
CCHCR1-215ENST00000488920 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 PRSS2P07478 247 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 NPSP0C0P6 89 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 IFITM2Q01629 132 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 UQCC3Q6UW78 93 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 KRTAP7-1Q8IUC3 87 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 TOMM7Q9P0U1 55 aa7.3□□□□□ -1.24
CCHCR1-215ENST00000488920 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
CCHCR1-215ENST00000488920 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
CCHCR1-215ENST00000488920 IGLV7-43P04211 117 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 G0S2P27469 103 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 CKS1BP61024 79 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 C9orf129Q5T035 196 aaKnown RBP7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 FAM19A3Q7Z5A8 133 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 TOMM6Q96B49 74 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
CCHCR1-215ENST00000488920 TRAV9-1A0A075B6T8 112 aa7.27□□□□□ -1.25
CCHCR1-215ENST00000488920 M0QXV9 152 aa7.27□□□□□ -1.25
CCHCR1-215ENST00000488920 HERVK_113P63121 156 aa7.27□□□□□ -1.25
CCHCR1-215ENST00000488920 SCGB3A1Q96QR1 104 aa7.27□□□□□ -1.25
CCHCR1-215ENST00000488920 TIMM17AQ99595 171 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms