RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 E9PLD3 99 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 SS18Q15532 418 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 CDPF1Q6NVV7 123 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 C12orf57Q99622 126 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 PMCHL2Q9BQD1 86 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 VAMP8Q9BV40 100 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 KLK12Q9UKR0 248 aa7.19□□□□□ -1.26
USP11-209ENST00000488848 DNAH17Q9UFH2 4485 aa7.18□□□□□ -1.26
USP11-209ENST00000488848 H3BRM9 83 aa7.18□□□□□ -1.26
USP11-209ENST00000488848 CRPP02741 224 aa7.18□□□□□ -1.26
USP11-209ENST00000488848 S100A12P80511 92 aa7.18□□□□□ -1.26
USP11-209ENST00000488848 GEMIN7Q9H840 131 aaKnown RBP7.18□□□□□ -1.26
USP11-209ENST00000488848 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
USP11-209ENST00000488848 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 DLEU1O43261 78 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 IGHV3-30P01768 117 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 IGHV3-33P01772 117 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 IGHV3-30-5P0DP03 117 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 HERVK_113P61574 105 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 COX6A2Q02221 97 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 FOXI1Q12951 378 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 ZFAND6Q6FIF0 208 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
USP11-209ENST00000488848 COX11Q9Y6N1 276 aa7.17□□□□□ -1.26
USP11-209ENST00000488848 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 ANKRD39Q53RE8 183 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 UBE2DNLQ8IWF7 75 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 LINC00469Q8N7U9 141 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 UBE2WQ96B02 151 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
USP11-209ENST00000488848 NBDYA0A0U1RRE5 68 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 hDV102S1A0JD36 115 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 MAJINQ3KP22 176 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 TMEM170BQ5T4T1 132 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 Q6ZR54 194 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 STPG4Q8N801 248 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 LINC00476Q8WZB0 136 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 RMI2Q96E14 147 aa7.15□□□□□ -1.26
USP11-209ENST00000488848 HECTD4Q9Y4D8 3996 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 LEPROTO15243 131 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 NMUP48645 174 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 BOD1L2Q8IYS8 172 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
USP11-209ENST00000488848 IGHV3-64A0A075B6Q5 118 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 COX7A2LO14548 114 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 COX8AP10176 69 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 XCL1P47992 114 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 CLPSL2Q6UWE3 100 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 PAM16Q9Y3D7 125 aa7.13□□□□□ -1.27
USP11-209ENST00000488848 F8WDY8 70 aa7.12□□□□□ -1.27
USP11-209ENST00000488848 J3QQQ9 107 aa7.12□□□□□ -1.27
USP11-209ENST00000488848 Q8IZM0 81 aa7.12□□□□□ -1.27
USP11-209ENST00000488848 TM2D2Q9BX73 214 aa7.12□□□□□ -1.27
USP11-209ENST00000488848 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
USP11-209ENST00000488848 IGKV3OR2-268A0A0C4DH90 116 aa7.11□□□□□ -1.27
USP11-209ENST00000488848 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
USP11-209ENST00000488848 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
USP11-209ENST00000488848 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
USP11-209ENST00000488848 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
USP11-209ENST00000488848 ZNF625Q96I27 306 aaPredicted RBP7.11□□□□□ -1.27
USP11-209ENST00000488848 EPPK1P58107 5090 aaKnown RBP7.1□□□□□ -1.27
USP11-209ENST00000488848 IGLV10-54A0A075B6I4 117 aa7.1□□□□□ -1.27
USP11-209ENST00000488848 GVQW2A0A096LPI5 108 aaPredicted RBP7.1□□□□□ -1.27
USP11-209ENST00000488848 NDUFA1O15239 70 aa7.1□□□□□ -1.27
USP11-209ENST00000488848 APOMO95445 188 aa7.1□□□□□ -1.27
USP11-209ENST00000488848 SPINK8P0C7L1 97 aa7.1□□□□□ -1.27
USP11-209ENST00000488848 CXCL5P42830 114 aa7.1□□□□□ -1.27
USP11-209ENST00000488848 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
USP11-209ENST00000488848 RYR2Q92736 4967 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 HYDINQ4G0P3 5121 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 TSTD3H0UI37 97 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 SLC25A34Q6PIV7 304 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 C5orf38Q86SI9 138 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 C15orf56Q8N910 161 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 HIGD1BQ9P298 99 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 UQCR10Q9UDW1 63 aa7.09□□□□□ -1.27
USP11-209ENST00000488848 IGKV2D-24A0A075B6R9 120 aa7.08□□□□□ -1.28
USP11-209ENST00000488848 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
USP11-209ENST00000488848 COX7B2Q8TF08 81 aa7.08□□□□□ -1.28
USP11-209ENST00000488848 C2orf48Q96LS8 159 aa7.08□□□□□ -1.28
USP11-209ENST00000488848 MIEN1Q9BRT3 115 aa7.08□□□□□ -1.28
USP11-209ENST00000488848 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
USP11-209ENST00000488848 MYMXA0A1B0GTQ4 84 aa7.07□□□□□ -1.28
USP11-209ENST00000488848 TIMM17BO60830 172 aa7.07□□□□□ -1.28
USP11-209ENST00000488848 LGALS3P17931 250 aaKnown RBP7.07□□□□□ -1.28
USP11-209ENST00000488848 HERV-K104P63124 156 aa7.07□□□□□ -1.28
USP11-209ENST00000488848 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
USP11-209ENST00000488848 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms