RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 NDUFC2-KCTD14E9PQ53 114 aa3.85□□□□□ -1.79
PTCH1-211ENST00000488809 RPL28P46779 137 aaKnown RBP3.85□□□□□ -1.79
PTCH1-211ENST00000488809 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
PTCH1-211ENST00000488809 LBHQ53QV2 105 aaPredicted RBP3.85□□□□□ -1.79
PTCH1-211ENST00000488809 CT83Q5H943 113 aa3.85□□□□□ -1.79
PTCH1-211ENST00000488809 UNQ6190/PRO20217Q6UXQ8 127 aa3.85□□□□□ -1.79
PTCH1-211ENST00000488809 FAM231DQ6ZW35 169 aa3.85□□□□□ -1.79
PTCH1-211ENST00000488809 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 IFITM10A6NMD0 228 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 SMLR1H3BR10 107 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 K7EN84 100 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 RAB4AP20338 218 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 HBBP68871 147 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 TPRXLQ17RH7 258 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 AMN1Q8IY45 258 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 OCC1Q8TAD7 63 aa3.84□□□□□ -1.79
PTCH1-211ENST00000488809 HIGD1CA8MV81 97 aa3.83□□□□□ -1.8
PTCH1-211ENST00000488809 RIGQ13278 110 aa3.83□□□□□ -1.8
PTCH1-211ENST00000488809 C10orf25Q5T742 122 aa3.83□□□□□ -1.8
PTCH1-211ENST00000488809 SPANXA1Q9NS26 97 aa3.83□□□□□ -1.8
PTCH1-211ENST00000488809 A0A087X002 238 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 LINC00862A6NCI5 91 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 PRSS2P07478 247 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 IFI27P40305 119 aaPredicted RBP3.82□□□□□ -1.8
PTCH1-211ENST00000488809 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
PTCH1-211ENST00000488809 CTAG1AP78358 180 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 MRPS36P82909 103 aaKnown RBP3.82□□□□□ -1.8
PTCH1-211ENST00000488809 C9orf129Q5T035 196 aaKnown RBP3.82□□□□□ -1.8
PTCH1-211ENST00000488809 LINC00173Q6ZV60 143 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 C20orf78Q9BR46 151 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 CTDSP1Q9GZU7 261 aa3.82□□□□□ -1.8
PTCH1-211ENST00000488809 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 BCE1O60756 84 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 CKS1BP61024 79 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 RPL32P62910 135 aaKnown RBP3.81□□□□□ -1.8
PTCH1-211ENST00000488809 RGS21Q2M5E4 152 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 NRACQ8N912 160 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 TP73-AS1Q9UF72 201 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 C22orf24Q9Y442 160 aa3.81□□□□□ -1.8
PTCH1-211ENST00000488809 ZNF727A8MUV8 499 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 CEBPGP53567 150 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 RPL39P62891 51 aaKnown RBP3.8□□□□□ -1.8
PTCH1-211ENST00000488809 KIAA0087Q14695 138 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 FAM229BQ4G0N7 80 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 MRPL55Q7Z7F7 128 aaKnown RBP3.8□□□□□ -1.8
PTCH1-211ENST00000488809 LINC01561Q8N1V8 128 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 RETNLBQ9BQ08 111 aa3.8□□□□□ -1.8
PTCH1-211ENST00000488809 TRBV24-1A0A075B6N3 115 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 RAB5AP20339 215 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 CKS2P33552 79 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 UBE2AP49459 152 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 MRPL51Q4U2R6 128 aaKnown RBP3.79□□□□□ -1.8
PTCH1-211ENST00000488809 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
PTCH1-211ENST00000488809 FAM104BQ5XKR9 115 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 TEX43Q6ZNM6 134 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 C2orf88Q9BSF0 95 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 SMIM2Q9BVW6 85 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 BATF3Q9NR55 127 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 OSTCQ9NRP0 149 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 TOMM7Q9P0U1 55 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 NAT8BQ9UHF3 227 aa3.79□□□□□ -1.8
PTCH1-211ENST00000488809 A0A1B0GW15 77 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 TNFRSF6BO95407 300 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 S100A8P05109 93 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 C6orf226Q5I0X4 101 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 Q6ZN92 141 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 SLC51BQ86UW2 128 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 Q8IZM0 81 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 LINC00469Q8N7U9 141 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 TMEM141Q96I45 108 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 PPDPFQ9H3Y8 114 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 PYGO1Q9Y3Y4 419 aa3.78□□□□□ -1.8
PTCH1-211ENST00000488809 F8W036 122 aa3.77□□□□□ -1.81
PTCH1-211ENST00000488809 PPBPP02775 128 aa3.77□□□□□ -1.81
PTCH1-211ENST00000488809 CXCL5P42830 114 aa3.77□□□□□ -1.81
PTCH1-211ENST00000488809 BLOC1S1P78537 153 aa3.77□□□□□ -1.81
PTCH1-211ENST00000488809 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
PTCH1-211ENST00000488809 ALKBH7Q9BT30 221 aaPredicted RBP3.77□□□□□ -1.81
PTCH1-211ENST00000488809 XAGE1AQ9HD64 81 aa3.77□□□□□ -1.81
PTCH1-211ENST00000488809 IGLV4-3A0A075B6K6 122 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 D6R8Y8 96 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 F8VRH5 84 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 SEC11AP67812 179 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 SPAG11AQ6PDA7 123 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 FP248Q71RG6 208 aaPredicted RBP3.76□□□□□ -1.81
PTCH1-211ENST00000488809 NKAPP1Q8N9T2 125 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 FAM104AQ969W3 186 aa3.76□□□□□ -1.81
PTCH1-211ENST00000488809 V9GYV3 84 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms