RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 UBE2D1P51668 147 aa7.16□□□□□ -1.26
HLA-DMB-261ENST00000487996 MIAQ16674 131 aa7.16□□□□□ -1.26
HLA-DMB-261ENST00000487996 Q8N3U1 123 aa7.16□□□□□ -1.26
HLA-DMB-261ENST00000487996 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
HLA-DMB-261ENST00000487996 TRAV8-3A0A0A6YYJ7 113 aa7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 IGKV3OR2-268A0A0C4DH90 116 aa7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 HERVK_113P63121 156 aa7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 FAM19A3Q7Z5A8 133 aa7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 MRPL35Q9NZE8 188 aaKnown RBP7.15□□□□□ -1.26
HLA-DMB-261ENST00000487996 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGKCP01834 107 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGLC3P0DOY3 106 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 ZC2HC1BQ5TFG8 222 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 NFE4Q86UQ8 179 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 RMI2Q96E14 147 aa7.15□□□□□ -1.27
HLA-DMB-261ENST00000487996 C14orf144Q96I85 54 aa7.14□□□□□ -1.27
HLA-DMB-261ENST00000487996 CHAC1Q9BUX1 264 aa7.14□□□□□ -1.27
HLA-DMB-261ENST00000487996 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 ENHOQ6UWT2 76 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 LINC00476Q8WZB0 136 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 COX11Q9Y6N1 276 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 RYR2Q92736 4967 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 H3BRM9 83 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 LY6G6CO95867 125 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 PMCHL2Q9BQD1 86 aa7.13□□□□□ -1.27
HLA-DMB-261ENST00000487996 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
HLA-DMB-261ENST00000487996 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
HLA-DMB-261ENST00000487996 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGLV5-45A0A087WSX0 123 aa7.11□□□□□ -1.27
HLA-DMB-261ENST00000487996 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
HLA-DMB-261ENST00000487996 XCL1P47992 114 aa7.11□□□□□ -1.27
HLA-DMB-261ENST00000487996 HERVK_113P61574 105 aa7.11□□□□□ -1.27
HLA-DMB-261ENST00000487996 TMEM170BQ5T4T1 132 aa7.11□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGLV10-54A0A075B6I4 117 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 TM2D2Q9BX73 214 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 Q9HAA7 133 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGKV2D-24A0A075B6R9 120 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 IGHV3OR16-9A0A0B4J2B5 98 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 COX7A2LO14548 114 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
HLA-DMB-261ENST00000487996 LYSTQ99698 3801 aa7.09□□□□□ -1.27
HLA-DMB-261ENST00000487996 A0A087WZ39 114 aa7.09□□□□□ -1.27
HLA-DMB-261ENST00000487996 MALP21145 153 aa7.09□□□□□ -1.27
HLA-DMB-261ENST00000487996 CDKN2A-AS1Q9UH64 79 aa7.09□□□□□ -1.27
HLA-DMB-261ENST00000487996 GAGE12HA6NDE8 117 aa7.08□□□□□ -1.28
HLA-DMB-261ENST00000487996 APOMO95445 188 aa7.08□□□□□ -1.28
HLA-DMB-261ENST00000487996 COX6A2Q02221 97 aa7.08□□□□□ -1.28
HLA-DMB-261ENST00000487996 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
HLA-DMB-261ENST00000487996 VAMP8Q9BV40 100 aa7.08□□□□□ -1.28
HLA-DMB-261ENST00000487996 FOXI1Q12951 378 aa7.07□□□□□ -1.28
HLA-DMB-261ENST00000487996 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
HLA-DMB-261ENST00000487996 VPS13DQ5THJ4 4388 aa7.07□□□□□ -1.28
HLA-DMB-261ENST00000487996 TMEM223A0PJW6 202 aa7.07□□□□□ -1.28
HLA-DMB-261ENST00000487996 C5orf38Q86SI9 138 aa7.07□□□□□ -1.28
HLA-DMB-261ENST00000487996 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
HLA-DMB-261ENST00000487996 PSCAO43653 123 aa7.06□□□□□ -1.28
HLA-DMB-261ENST00000487996 Q6ZR54 194 aa7.06□□□□□ -1.28
HLA-DMB-261ENST00000487996 IGHV1-58A0A0C4DH39 117 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 hDV102S1A0JD36 115 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 SMIM1B2RUZ4 78 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 E9PLD3 99 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 STPG4Q8N801 248 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 PLEKHB2Q96CS7 222 aa7.05□□□□□ -1.28
HLA-DMB-261ENST00000487996 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 TSTD3H0UI37 97 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 M0R2N4 97 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 SPINK8P0C7L1 97 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 DDTP30046 118 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 KRTAP26-1Q6PEX3 210 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 C6orf223Q8N319 242 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 DNAH1Q9P2D7 4330 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 IGLV5-39A0A0G2JS06 123 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 LCE6AA0A183 80 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 LEPROTO15243 131 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 DLEU1O43261 78 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 PRSS2P07478 247 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 SFTA2Q6UW10 78 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 PAM16Q9Y3D7 125 aa7.04□□□□□ -1.28
HLA-DMB-261ENST00000487996 IGHV3-64A0A075B6Q5 118 aa7.03□□□□□ -1.28
HLA-DMB-261ENST00000487996 LGALS3P17931 250 aaKnown RBP7.03□□□□□ -1.28
HLA-DMB-261ENST00000487996 SPATA45Q537H7 98 aa7.03□□□□□ -1.28
HLA-DMB-261ENST00000487996 XP32Q5T750 250 aa7.03□□□□□ -1.28
HLA-DMB-261ENST00000487996 C1orf134Q5TEV5 83 aa7.03□□□□□ -1.28
HLA-DMB-261ENST00000487996 NMUP48645 174 aa7.02□□□□□ -1.29
HLA-DMB-261ENST00000487996 Q8IZM0 81 aa7.02□□□□□ -1.29
HLA-DMB-261ENST00000487996 ORAOV1Q8WV07 137 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms