RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 USP17L23D6RBM5 183 aa8.76□□□□□ -1.01
COL4A6-207ENST00000487645 LECT2O14960 151 aa8.76□□□□□ -1.01
COL4A6-207ENST00000487645 WFDC2Q14508 124 aa8.76□□□□□ -1.01
COL4A6-207ENST00000487645 COX7A2LO14548 114 aa8.75□□□□□ -1.01
COL4A6-207ENST00000487645 NDUFA6P56556 154 aa8.75□□□□□ -1.01
COL4A6-207ENST00000487645 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
COL4A6-207ENST00000487645 IGHV1-58A0A0C4DH39 117 aa8.74□□□□□ -1.01
COL4A6-207ENST00000487645 LEPROTL1O95214 131 aa8.74□□□□□ -1.01
COL4A6-207ENST00000487645 PRSS1P07477 247 aa8.74□□□□□ -1.01
COL4A6-207ENST00000487645 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-207ENST00000487645 HSPB8Q9UJY1 196 aa8.74□□□□□ -1.01
COL4A6-207ENST00000487645 A0A087WZ39 114 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 MALP21145 153 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 HERVK_113P63121 156 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 COX6A2Q02221 97 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 SPATA12Q7Z6I5 190 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
COL4A6-207ENST00000487645 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-207ENST00000487645 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
COL4A6-207ENST00000487645 A0A0J9YXV3 536 aa8.72□□□□□ -1.01
COL4A6-207ENST00000487645 APOMO95445 188 aa8.72□□□□□ -1.01
COL4A6-207ENST00000487645 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
COL4A6-207ENST00000487645 C15orf56Q8N910 161 aa8.72□□□□□ -1.01
COL4A6-207ENST00000487645 GEMIN7Q9H840 131 aaKnown RBP8.72□□□□□ -1.01
COL4A6-207ENST00000487645 GVQW2A0A096LPI5 108 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-207ENST00000487645 LOC105371267A0A1B0GV96 52 aa8.71□□□□□ -1.02
COL4A6-207ENST00000487645 FABP4P15090 132 aa8.71□□□□□ -1.02
COL4A6-207ENST00000487645 HECTD4Q9Y4D8 3996 aa8.7□□□□□ -1.02
COL4A6-207ENST00000487645 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
COL4A6-207ENST00000487645 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
COL4A6-207ENST00000487645 DNAH11Q96DT5 4516 aa8.7□□□□□ -1.02
COL4A6-207ENST00000487645 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-207ENST00000487645 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
COL4A6-207ENST00000487645 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
COL4A6-207ENST00000487645 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
COL4A6-207ENST00000487645 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
COL4A6-207ENST00000487645 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
COL4A6-207ENST00000487645 CHTOPQ9Y3Y2 248 aaKnown RBP8.69□□□□□ -1.02
COL4A6-207ENST00000487645 ZNF561-AS1K7EIQ3 104 aa8.68□□□□□ -1.02
COL4A6-207ENST00000487645 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
COL4A6-207ENST00000487645 MAP1LC3CQ9BXW4 147 aa8.68□□□□□ -1.02
COL4A6-207ENST00000487645 IGLV4-69A0A075B6H9 119 aa8.67□□□□□ -1.02
COL4A6-207ENST00000487645 F8VRH5 84 aa8.67□□□□□ -1.02
COL4A6-207ENST00000487645 F8WDY8 70 aa8.67□□□□□ -1.02
COL4A6-207ENST00000487645 S100A6P06703 90 aa8.67□□□□□ -1.02
COL4A6-207ENST00000487645 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
COL4A6-207ENST00000487645 LINC00469Q8N7U9 141 aa8.67□□□□□ -1.02
COL4A6-207ENST00000487645 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
COL4A6-207ENST00000487645 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-207ENST00000487645 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
COL4A6-207ENST00000487645 GCSHP23434 173 aa8.66□□□□□ -1.02
COL4A6-207ENST00000487645 FUSP35637 526 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL4A6-207ENST00000487645 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
COL4A6-207ENST00000487645 CHAC1Q9BUX1 264 aa8.66□□□□□ -1.02
COL4A6-207ENST00000487645 H3BRM9 83 aa8.65□□□□□ -1.02
COL4A6-207ENST00000487645 SLPIP03973 132 aa8.65□□□□□ -1.02
COL4A6-207ENST00000487645 ODF1Q14990 250 aa8.65□□□□□ -1.02
COL4A6-207ENST00000487645 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
COL4A6-207ENST00000487645 C2orf48Q96LS8 159 aa8.65□□□□□ -1.02
COL4A6-207ENST00000487645 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.02
COL4A6-207ENST00000487645 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
COL4A6-207ENST00000487645 ZNF22P17026 224 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-207ENST00000487645 SPAG11BQ08648 103 aa8.64□□□□□ -1.03
COL4A6-207ENST00000487645 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 H0Y8G0 127 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 SYS1-DBNDD2H3BUS1 97 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 SYCNQ0VAF6 134 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 KIAA0087Q14695 138 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 HIST3H2BBQ8N257 126 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
COL4A6-207ENST00000487645 PRSS2P07478 247 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 PLNP26678 52 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 S100A2P29034 98 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 Q8IZM0 81 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
COL4A6-207ENST00000487645 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
COL4A6-207ENST00000487645 DPM2O94777 84 aa8.61□□□□□ -1.03
COL4A6-207ENST00000487645 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
COL4A6-207ENST00000487645 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
COL4A6-207ENST00000487645 RNF151Q2KHN1 245 aa8.61□□□□□ -1.03
COL4A6-207ENST00000487645 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
COL4A6-207ENST00000487645 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
COL4A6-207ENST00000487645 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
COL4A6-207ENST00000487645 NDUFA1O15239 70 aa8.6□□□□□ -1.03
COL4A6-207ENST00000487645 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
COL4A6-207ENST00000487645 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
COL4A6-207ENST00000487645 HIST1H2BLQ99880 126 aa8.6□□□□□ -1.03
COL4A6-207ENST00000487645 TOMM7Q9P0U1 55 aa8.6□□□□□ -1.03
COL4A6-207ENST00000487645 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
COL4A6-207ENST00000487645 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 IGKCP01834 107 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 KRTDAPP60985 99 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 CKS1BP61024 79 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
COL4A6-207ENST00000487645 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms