RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 SPANXA1Q9NS26 97 aa15.38■□□□□ 0.05
SEMA3C-209ENST00000487621 IGHV3OR16-9A0A0B4J2B5 98 aa15.37■□□□□ 0.05
SEMA3C-209ENST00000487621 SRSF9Q13242 221 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEMA3C-209ENST00000487621 SPAG11BQ08648 103 aa15.36■□□□□ 0.05
SEMA3C-209ENST00000487621 SPINK6Q6UWN8 80 aa15.36■□□□□ 0.05
SEMA3C-209ENST00000487621 Q6ZRP5 223 aa15.35■□□□□ 0.05
SEMA3C-209ENST00000487621 ATP5L2Q7Z4Y8 100 aa15.35■□□□□ 0.05
SEMA3C-209ENST00000487621 OR10D4PQ8NGN7 298 aa15.35■□□□□ 0.05
SEMA3C-209ENST00000487621 RNF151Q2KHN1 245 aa15.34■□□□□ 0.05
SEMA3C-209ENST00000487621 ORMDL3Q8N138 153 aa15.34■□□□□ 0.05
SEMA3C-209ENST00000487621 TMEM136Q6ZRR5 245 aa15.33■□□□□ 0.04
SEMA3C-209ENST00000487621 A0A0J9YXV3 536 aa15.32■□□□□ 0.04
SEMA3C-209ENST00000487621 PRSS47A8MTI9 375 aa15.31■□□□□ 0.04
SEMA3C-209ENST00000487621 C9orf116Q5BN46 136 aaPredicted RBP15.31■□□□□ 0.04
SEMA3C-209ENST00000487621 PRELID3AQ96N28 172 aa15.31■□□□□ 0.04
SEMA3C-209ENST00000487621 MRPL35Q9NZE8 188 aaKnown RBP15.31■□□□□ 0.04
SEMA3C-209ENST00000487621 IFITM10A6NMD0 228 aa15.3■□□□□ 0.04
SEMA3C-209ENST00000487621 ORAOV1Q8WV07 137 aa15.3■□□□□ 0.04
SEMA3C-209ENST00000487621 PYGO1Q9Y3Y4 419 aa15.3■□□□□ 0.04
SEMA3C-209ENST00000487621 F8WDY8 70 aa15.29■□□□□ 0.04
SEMA3C-209ENST00000487621 KRTAP10-8P60410 259 aa15.29■□□□□ 0.04
SEMA3C-209ENST00000487621 RPL18AQ02543 176 aaKnown RBP15.29■□□□□ 0.04
SEMA3C-209ENST00000487621 LRP2P98164 4655 aa15.29■□□□□ 0.04
SEMA3C-209ENST00000487621 C10orf25Q5T742 122 aa15.28■□□□□ 0.04
SEMA3C-209ENST00000487621 IGLV4-3A0A075B6K6 122 aa15.27■□□□□ 0.04
SEMA3C-209ENST00000487621 RAB5AP20339 215 aa15.27■□□□□ 0.04
SEMA3C-209ENST00000487621 ODF1Q14990 250 aa15.27■□□□□ 0.04
SEMA3C-209ENST00000487621 IFI27P40305 119 aaPredicted RBP15.26■□□□□ 0.03
SEMA3C-209ENST00000487621 REG3GQ6UW15 175 aa15.26■□□□□ 0.03
SEMA3C-209ENST00000487621 PNRC1Q12796 327 aaPredicted RBP15.25■□□□□ 0.03
SEMA3C-209ENST00000487621 LINC00242Q5T6M2 205 aa15.25■□□□□ 0.03
SEMA3C-209ENST00000487621 PSORS1C2Q9UIG4 136 aa15.25■□□□□ 0.03
SEMA3C-209ENST00000487621 LAMTOR2Q9Y2Q5 125 aa15.25■□□□□ 0.03
SEMA3C-209ENST00000487621 A0A087WZ39 114 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 NDUFA1O15239 70 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 TLX1NBP0CAT3 122 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 KIAA0087Q14695 138 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 UNQ6190/PRO20217Q6UXQ8 127 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 PHF5AQ7RTV0 110 aaKnown RBP15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 ANAPC16Q96DE5 110 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 C6orf48Q9UBA6 75 aa15.24■□□□□ 0.03
SEMA3C-209ENST00000487621 TGIF2-C20orf24A0A0A6YYL0 155 aa15.22■□□□□ 0.03
SEMA3C-209ENST00000487621 LOC389332A0A1B0GUA5 103 aa15.22■□□□□ 0.03
SEMA3C-209ENST00000487621 TMEM141Q96I45 108 aa15.22■□□□□ 0.03
SEMA3C-209ENST00000487621 IMMP2LQ96T52 175 aa15.22■□□□□ 0.03
SEMA3C-209ENST00000487621 MAP1LC3AQ9H492 121 aa15.21■□□□□ 0.03
SEMA3C-209ENST00000487621 MT-ND4LP03901 98 aa15.2■□□□□ 0.02
SEMA3C-209ENST00000487621 Q8N8P6 123 aa15.2■□□□□ 0.02
SEMA3C-209ENST00000487621 UBE2D1P51668 147 aa15.19■□□□□ 0.02
SEMA3C-209ENST00000487621 FAM168BA1KXE4 195 aa15.18■□□□□ 0.02
SEMA3C-209ENST00000487621 MT-ND6P03923 174 aa15.18■□□□□ 0.02
SEMA3C-209ENST00000487621 LINC00173Q6ZV60 143 aa15.18■□□□□ 0.02
SEMA3C-209ENST00000487621 C2orf66Q6UXQ4 117 aa15.17■□□□□ 0.02
SEMA3C-209ENST00000487621 TEX43Q6ZNM6 134 aa15.17■□□□□ 0.02
SEMA3C-209ENST00000487621 AMELXQ99217 191 aa15.17■□□□□ 0.02
SEMA3C-209ENST00000487621 C1orf137Q5JT78 98 aa15.16■□□□□ 0.02
SEMA3C-209ENST00000487621 ZC2HC1BQ5TFG8 222 aa15.16■□□□□ 0.02
SEMA3C-209ENST00000487621 KRTAP11-1Q8IUC1 163 aa15.16■□□□□ 0.02
SEMA3C-209ENST00000487621 KRTAP7-1Q8IUC3 87 aa15.16■□□□□ 0.02
SEMA3C-209ENST00000487621 LINC01561Q8N1V8 128 aa15.16■□□□□ 0.02
SEMA3C-209ENST00000487621 CYSLTR1Q9Y271 337 aa15.16■□□□□ 0.02
SEMA3C-209ENST00000487621 RAB14P61106 215 aa15.14■□□□□ 0.01
SEMA3C-209ENST00000487621 IGIPA6NJ69 53 aa15.13■□□□□ 0.01
SEMA3C-209ENST00000487621 C2orf82Q6UX34 121 aa15.13■□□□□ 0.01
SEMA3C-209ENST00000487621 TRBV30A0A0K0K1B3 111 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 K7EMI3 77 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 NPSP0C0P6 89 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 GAGE2EQ4V326 116 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 ORMDL2Q53FV1 153 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 FAM19A3Q7Z5A8 133 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 C2orf88Q9BSF0 95 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 GAGE2DQ9UEU5 116 aa15.12■□□□□ 0.01
SEMA3C-209ENST00000487621 IGLV7-43P04211 117 aa15.1■□□□□ 0.01
SEMA3C-209ENST00000487621 CLLU1Q5K131 121 aa15.1■□□□□ 0.01
SEMA3C-209ENST00000487621 Q6ZN92 141 aa15.1■□□□□ 0.01
SEMA3C-209ENST00000487621 FAM19A5Q7Z5A7 132 aaPredicted RBP15.1■□□□□ 0.01
SEMA3C-209ENST00000487621 VCX2Q9H322 139 aa15.1■□□□□ 0.01
SEMA3C-209ENST00000487621 NXT2Q9NPJ8 142 aaKnown RBP15.09■□□□□ 0.01
SEMA3C-209ENST00000487621 RNF213Q63HN8 5207 aa15.09■□□□□ 0.01
SEMA3C-209ENST00000487621 ADCYAP1P18509 176 aa15.08■□□□□ 0
SEMA3C-209ENST00000487621 CTDSP1Q9GZU7 261 aa15.08■□□□□ 0
SEMA3C-209ENST00000487621 NDUFC2-KCTD14E9PQ53 114 aa15.07■□□□□ 0
SEMA3C-209ENST00000487621 C9orf129Q5T035 196 aaKnown RBP15.07■□□□□ 0
SEMA3C-209ENST00000487621 PACRGQ96M98 296 aaPredicted RBP15.06■□□□□ 0
SEMA3C-209ENST00000487621 M0QXV9 152 aa15.04■□□□□ -0
SEMA3C-209ENST00000487621 DIRC1Q969H9 104 aa15.04■□□□□ -0
SEMA3C-209ENST00000487621 KIAA1644Q3SXP7 199 aa15.03■□□□□ -0
SEMA3C-209ENST00000487621 TOMM6Q96B49 74 aa15.03■□□□□ -0
SEMA3C-209ENST00000487621 TIMM17AQ99595 171 aa15.03■□□□□ -0
SEMA3C-209ENST00000487621 Q8IZM0 81 aa15.02■□□□□ -0
SEMA3C-209ENST00000487621 TMEM218A2RU14 115 aa15.01□□□□□ -0.01
SEMA3C-209ENST00000487621 H0Y9J4 135 aa15.01□□□□□ -0.01
SEMA3C-209ENST00000487621 TOMM7Q9P0U1 55 aa15.01□□□□□ -0.01
SEMA3C-209ENST00000487621 CDKN2A-AS1Q9UH64 79 aa15.01□□□□□ -0.01
SEMA3C-209ENST00000487621 PRSS2P07478 247 aa15□□□□□ -0.01
SEMA3C-209ENST00000487621 HERVK_113P63121 156 aa15□□□□□ -0.01
SEMA3C-209ENST00000487621 UQCC3Q6UW78 93 aa15□□□□□ -0.01
SEMA3C-209ENST00000487621 TRAV9-1A0A075B6T8 112 aa14.99□□□□□ -0.01
SEMA3C-209ENST00000487621 G0S2P27469 103 aa14.99□□□□□ -0.01
SEMA3C-209ENST00000487621 SEC11AP67812 179 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms