RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 WFDC11Q8NEX6 87 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 Q9UF83 564 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 JMJD7-PLA2G4BH0Y9G9 81 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 PRM2P04554 102 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 TMEM86BQ8N661 226 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 XCL1P47992 114 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 HAMPP81172 84 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 Q5XG85 94 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 Q6ZSN1 163 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 FAM19A1Q7Z5A9 133 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-209ENST00000487188 XCL2Q9UBD3 114 aa4.5□□□□□ -1.69
VPS13D-209ENST00000487188 PTPN13Q12923 2485 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 FAM104AQ969W3 186 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 BBC3Q96PG8 261 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-209ENST00000487188 CCKP06307 115 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 Q8NA96 180 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 J3QLI3 93 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
VPS13D-209ENST00000487188 DYNLRB2Q8TF09 96 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
VPS13D-209ENST00000487188 INSP01308 110 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 TACC2O95359 2948 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 LAMTOR3Q9UHA4 124 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 TLN1Q9Y490 2541 aaKnown RBP4.48□□□□□ -1.69
VPS13D-209ENST00000487188 RELNP78509 3460 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 C11orf71Q6IPW1 123 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 CFAP46Q8IYW2 2715 aa4.48□□□□□ -1.69
VPS13D-209ENST00000487188 SMIM26A0A096LP01 95 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 K7ENP7 123 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 RPL35AP18077 110 aaKnown RBP4.47□□□□□ -1.69
VPS13D-209ENST00000487188 CCL18P55774 89 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 CFHR3Q02985 330 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 ZNF462Q96JM2 2506 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 J3QKU1 62 aa4.47□□□□□ -1.69
VPS13D-209ENST00000487188 IGHV4-38-2P0DP08 117 aa4.46□□□□□ -1.69
VPS13D-209ENST00000487188 LMO4P61968 165 aa4.46□□□□□ -1.69
VPS13D-209ENST00000487188 LINC00336Q6ZUF6 198 aa4.46□□□□□ -1.69
VPS13D-209ENST00000487188 SPG11Q96JI7 2443 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 TRAV7A0A075B6U4 112 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 K7EQD1 137 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 UBE2E2Q96LR5 201 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 CSPG4Q6UVK1 2322 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 ZFYVE26Q68DK2 2539 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 IGKV2-28A0A075B6P5 120 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 F8WEM9 126 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 IGKV2D-28P01615 120 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 A6NDX4 124 aa4.46□□□□□ -1.7
VPS13D-209ENST00000487188 FBXL19-AS1Q494R0 122 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 TRGV2A0A075B6R0 118 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 IGLV1-40P01703 118 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 RMI2Q96E14 147 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 V9GYY9 64 aa4.45□□□□□ -1.7
VPS13D-209ENST00000487188 C1orf195Q5TG92 126 aa4.44□□□□□ -1.7
VPS13D-209ENST00000487188 C10orf99Q6UWK7 81 aa4.44□□□□□ -1.7
VPS13D-209ENST00000487188 TENM4Q6N022 2769 aa4.44□□□□□ -1.7
VPS13D-209ENST00000487188 STHQ8IWL8 128 aa4.44□□□□□ -1.7
VPS13D-209ENST00000487188 TRGV4A0A0C4DH28 118 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 TRBV10-1A0A0K0K1A3 114 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 TRBV6-4A0A1B0GX49 114 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 NBPF19A0A087WUL8 3843 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 ADGRG4Q8IZF6 3080 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 TRBV10-3A0A0K0K1G6 114 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 Q96MF0 132 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 OBSCN-AS1Q96MR7 158 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 TMEM89A2RUT3 159 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 CDSNQ15517 529 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 ZNF843Q8N446 348 aa4.43□□□□□ -1.7
VPS13D-209ENST00000487188 H7BZZ5 65 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 ADORA2A-AS1P86434 159 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 PRB1P04280 392 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 SLURP1P55000 103 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 DEFB136Q30KP8 78 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 Q8N814 137 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 WNK1Q9H4A3 2382 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 TRBV7-6A0A0J9YX20 115 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 NDUFC1O43677 76 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 UBR5O95071 2799 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-209ENST00000487188 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-209ENST00000487188 Q6ZTI0 123 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 SCXQ7RTU7 201 aa4.42□□□□□ -1.7
VPS13D-209ENST00000487188 FLNBO75369 2602 aaKnown RBP4.42□□□□□ -1.7
VPS13D-209ENST00000487188 IGHV4-61A0A0C4DH41 118 aa4.41□□□□□ -1.7
VPS13D-209ENST00000487188 IGHV4-59P01825 116 aa4.41□□□□□ -1.7
VPS13D-209ENST00000487188 NTM-AS1Q6ZSK4 140 aa4.41□□□□□ -1.7
VPS13D-209ENST00000487188 C11orf72Q8NBR9 251 aa4.41□□□□□ -1.7
VPS13D-209ENST00000487188 MAP6D1Q9H9H5 199 aa4.41□□□□□ -1.7
VPS13D-209ENST00000487188 SS18Q15532 418 aa4.41□□□□□ -1.7
VPS13D-209ENST00000487188 NOP10Q9NPE3 64 aaKnown RBP4.41□□□□□ -1.7
VPS13D-209ENST00000487188 GCN1Q92616 2671 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms