RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 TMEM141Q96I45 108 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 TIMM17AQ99595 171 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 Q9UF83 564 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 SORL1Q92673 2214 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 C20orf202A1L168 122 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 IGIPA6NJ69 53 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
USP41-204ENST00000486536 Q6ZN92 141 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 ATP6V0E2Q8NHE4 81 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 VSIG2Q96IQ7 327 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 SCGB3A1Q96QR1 104 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 CHCHD7Q9BUK0 85 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 TIMM21Q9BVV7 248 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 MUC4Q99102 2169 aa4.1□□□□□ -1.75
USP41-204ENST00000486536 TRBV25-1A0A075B6N4 114 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 TRAV10A0A0B4J240 114 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 TRAV12-1A0A0B4J245 112 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 LINC01545Q5VT33 79 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 LGALS9CQ6DKI2 356 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 Q6ZTC4 211 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 LINC00173Q6ZV60 143 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 Q8N976 141 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 ICOSQ9Y6W8 199 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 NOTCH1P46531 2555 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 CMYA5Q8N3K9 4069 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 NBEAL2Q6ZNJ1 2754 aa4.09□□□□□ -1.75
USP41-204ENST00000486536 DEFB131BA0A096LNP1 70 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 A0A0J9YY99 117 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 HTN3P15516 51 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 PKIAP61925 76 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 RPL39P62891 51 aaKnown RBP4.08□□□□□ -1.76
USP41-204ENST00000486536 S100A12P80511 92 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 MRPS36P82909 103 aaKnown RBP4.08□□□□□ -1.76
USP41-204ENST00000486536 TEX43Q6ZNM6 134 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 MRPL52Q86TS9 123 aaKnown RBP4.08□□□□□ -1.76
USP41-204ENST00000486536 C12orf57Q99622 126 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 TMEM243Q9BU79 118 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 UBE2D4Q9Y2X8 147 aa4.08□□□□□ -1.76
USP41-204ENST00000486536 NOTCH3Q9UM47 2321 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.07□□□□□ -1.76
USP41-204ENST00000486536 A0A087WX48 190 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 A0A096LPF7 62 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 IGKV2-29A2NJV5 120 aaPredicted RBP4.07□□□□□ -1.76
USP41-204ENST00000486536 UBE2L6O14933 153 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 ZNF25P17030 456 aaPredicted RBP4.07□□□□□ -1.76
USP41-204ENST00000486536 PMVKQ15126 192 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 C15orf53Q8NAA6 179 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 DEFB104AQ8WTQ1 72 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 BAALCQ8WXS3 180 aa4.07□□□□□ -1.76
USP41-204ENST00000486536 GEMIN7Q9H840 131 aaKnown RBP4.07□□□□□ -1.76
USP41-204ENST00000486536 DNAH3Q8TD57 4116 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 F8VRH5 84 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 FGF6P10767 208 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 PLNP26678 52 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 LELP1Q5T871 98 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 TMEM101Q96IK0 257 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 AMELXQ99217 191 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 CST9LQ9H4G1 147 aa4.06□□□□□ -1.76
USP41-204ENST00000486536 CHTOPQ9Y3Y2 248 aaKnown RBP4.06□□□□□ -1.76
USP41-204ENST00000486536 HSBP1L1C9JCN9 74 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 DPM2O94777 84 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 IGKCP01834 107 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 C14orf177Q52M58 125 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 OR5A1Q8NGJ0 315 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 FAM104AQ969W3 186 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 C2orf88Q9BSF0 95 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 VAMP8Q9BV40 100 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
USP41-204ENST00000486536 MRPL35Q9NZE8 188 aaKnown RBP4.05□□□□□ -1.76
USP41-204ENST00000486536 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
USP41-204ENST00000486536 TRAV8-6A0A0B4J262 113 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 SEC11AP67812 179 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 CXCL6P80162 114 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 CEMP1Q6PRD7 247 aaPredicted RBP4.04□□□□□ -1.76
USP41-204ENST00000486536 LYPD5Q6UWN5 251 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 Q6ZUT4 128 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 FAM19A3Q7Z5A8 133 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 BIRC6Q9NR09 4857 aa4.04□□□□□ -1.76
USP41-204ENST00000486536 IGLV4-69A0A075B6H9 119 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 TMEM262E9PQX1 116 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 CCL25O15444 150 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 IGLC3P0DOY3 106 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 UBE2D1P51668 147 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 TCTAP57738 103 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
USP41-204ENST00000486536 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
USP41-204ENST00000486536 TINCRA0A1B0GVN0 87 aa4.02□□□□□ -1.77
USP41-204ENST00000486536 NUPR2A6NF83 97 aa4.02□□□□□ -1.77
USP41-204ENST00000486536 C11orf86A6NJI1 115 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms